Salmo trutta (river trout): 115159145 Help Entry 115159145         CDS       T08542                                  Name (RefSeq) roquin-2-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism stru  Salmo trutta (river trout) Brite KEGG Orthology (KO) [BR:stru00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:stru03000]     115159145    04121 Ubiquitin system [BR:stru04121]     115159145 Transcription factors [BR:stru03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     115159145 Ubiquitin system [BR:stru04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     115159145 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf_CCCH_4 Prok-RING_4 zf-CCCH_UNK zf-RING_10 zf-RING_4 zf-C3HC4 Motif Other DBs NCBI-GeneID:  115159145 NCBI-ProteinID:  XP_029564458 Ensembl:  ENSSTUG00000012538 LinkDB All DBs Position 23:complement(5546886..5578212) Genome browser AA seq 1099 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSNGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD IDLLPVNCALLQLVGAQVLESQPVTLSSAVEVEHYEVCRVCVEELALYLKPISGGKGVVT LSPSALSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLELLANI DHNPDAASPSWDELESVMLAVKVMVDGLVEFIQNFSKKSHETPQPQPNSKYKTSMCRDLR QQGGCPRGSNCTFAHTQDELEKYRMRNKKISGVGRPFPLAQGSMGSEGGDSGEEACAGGL KGSDKVGSGSLTEGSTHPQLIPRGGNMMEEMKRERSVDNGANGLTGSSRSSSGSMEQKSV SPPKTPVNHSSAPSPHGPGSRVECGSGHPKQGHFLMRGPPHQPPPHQPQSSELYYQDSRP PYDTQPYQPASNYYTSTMHHHKPCMTRFLRSSHVLESSLPPSMAPPYSEQHPSFPPPRER AGPSPYGPPPAPQYGPLAPAHGGYAPLYDSRRMWRPQLYHREDARSNSLPPEVLHSSVYQ PPLRERYASLDSPYCSAGEHRAALHRDSYGRVPLGYEDLFKRKQEQWAHHHHDNMNRPSQ SSPVFTVDFGAEHDSGGDQCMNCKYRGEERLAHYSPWSCGTISTCISPFEAEHHNASAHS CSEHSEVDNGERKRWLHTFEPYRRLKDEDPIIPFGEGPIISKWGAISRASRTGYHTTDPV QATACQGSNSTTPINFRDYGPHIGHGDYRWSSRGSDSSSHSSFLESDQLGVCELSARERS FSSGEKTGAGDLLQTDYCTDTTESEPDRDIELELSVLDMEDIDLQDNSQQSEESLELRDP HLLTPPSSEPQRSQTDKLSADKMEAHLLKKMAFRKSLSPGGLGSGGLSVGKLMMRTGPPR LGDMGPRPNTGPEMLLNGS NT seq 3300 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaggcagcccaatggacagagttcctctcctgccccatctgctacaatgag tttgacagtaatggccacaagcccatcagtctgggctgctcgcacaccgtgtgtaagacc tgtctgcacaagctgcaccgcaaggcctgccccttcgaccagacagccatcagcactgac attgacctcctgcccgtcaactgtgccctgctacagctggtgggagctcaggtcctggag tcccagcctgtgactctgagcagtgctgtggaggtagagcactatgaggtgtgcagggtg tgtgtggaagagctggctctctatctcaaacccatcagtggaggaaaaggtgtggtgacc ctcagtccgagcgcgctcagtcgacccatgcagaggaagctggtgacactggtcaactgc cagctggtggaagaggaggggcgggtacgggcggtgcgggctggccggtcgctaggggaa cgtaccgtcacagagctcatcctgcagcaccagaacccacagcagctctctgccaacctg tgggccgccgtcagggcacggggatgccagttcctggggcctgcgatgcaggaggacgct ctaaagctggtgttgctggccctagaggacggctcagctttgtccaggaaggtactggtg ctgtttgtggtccagaaactggaagctaggttcccccaggcctccaagacctccatcgga cacgtggtccagctgctctacagagcctcctgctttaaggtgaccaagcgtgacgaggac tcgtcgctgatgcagctcaaggaggagttccgtacctacgaggcgctgcgccgcgagcac gacgcccagatcgtacacatcgccatggaggcggggctccgtatctcccctgagcagtgg tcctccctgctctacggagacctcatccacaagtcacacatgcagtctatcatcgataag ctccagtccccagagtcctttgctaagagtgtccaggagctgacgatagttctacagaga acaggagaccctgctaacctgaacagcctcagaccacacctggaactactggccaacatc gaccacaacccagacgcggcgtctccatcgtgggacgagctggagagcgtgatgctggcg gtgaaggtgatggtcgatggtctggtggagtttattcagaacttcagtaagaagagccac gagacaccacagccgcagcccaacagcaagtataagaccagtatgtgtcgagacctccgg cagcagggtggctgtcctcgaggatccaactgcaccttcgcacacacacaggacgagcta gagaagtacagaatgagaaacaagaagatcagtggcgtgggccggcccttccccctagcc caggggagtatgggtagtgaggggggcgactcaggagaggaggcctgcgctgggggactg aagggctcagacaaggtggggtcggggtccctaacagaggggtccacacacccccagctc atccccaggggaggcaacatgatggaggagatgaagagggagaggtctgttgataacgga gccaacggactcacaggctccagccgctcctcatctggctctatggaacagaagtctgtt tctcctccaaagacgcctgtaaaccactcctcagctccttctccccatggtccggggtct agggtagagtgtggctctggtcatcccaaacaagggcacttcctaatgagaggaccccct caccagcctcctccccaccagcctcagtcctctgaactgtactaccaggactcccgacct ccctacgacacacagccctaccagccagccagtaactactacacctctacaatgcaccac cacaaaccctgcatgacccgcttcctgcgttccagccacgtcctcgagtcctctctgccg ccttccatggcccctccgtactccgagcagcacccctccttccccccaccacgggagcga gcgggtccttctccctacggccccccgccggccccccagtacgggcccctggccccggcc catggtggctatgctcccctgtatgacagtcggcgtatgtggagaccccagctgtaccac cgcgaggatgccaggagtaactccctgcctcccgaggtgctgcactcctctgtgtaccag ccccccctccgagagagatatgcctccctggacagtccctactgctcggcgggggagcac agagcagcgctgcacagggactcttatgggcgtgttcctctcggatacgaggatctgttc aagcggaaacaggagcaatgggcacaccatcaccacgacaacatgaacaggccctcccag tcctcccccgtcttcaccgtagactttggtgcagagcatgacagtggaggtgatcagtgt atgaactgtaagtaccgtggtgaggagcgtctggcccactactctccctggtcctgtggt accattagtacctgcatcagcccctttgaagcagagcatcacaacgcctcagctcactcc tgctccgaacactcagaagtagataatggtgaaaggaagcggtggctacacacgtttgag ccgtaccgtcgtctgaaagacgaggatcccatcatcccatttggagagggacccatcatc tctaaatggggggctatctcccgcgcctctcgtacaggttaccacaccactgaccccgtc caggccacagcctgccagggaagcaacagcaccacccccatcaacttcagagattatggt ccgcacatcggtcacggtgactacaggtggagctcccgtgggtctgactcatccagccac tctagtttcctagagagtgaccagctgggagtgtgtgagctttctgcacgtgagcggtcc ttcagcagtggagagaagactggtgcaggagacctgctgcagacggactactgtacggac acgacagagagcgaaccggacagagacattgagctggagctgtctgtactggacatggag gacattgacctgcaggacaacagtcaacaatctgaggagtcccttgagctaagggacccc cacctcctcacccctcccagcagtgaaccccagaggagccagacagacaagctgtccgct gacaagatggaggctcacctgctgaagaagatggccttcaggaagtctctctcccctggc ggtctgggctcaggaggcctcagcgtggggaagctgatgatgagaaccggccctccaagg cttggggacatgggccctcgccccaacacaggccctgagatgctcctcaacggcagttga

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