Salmo trutta (river trout): 115159162
Help
Entry
115159162 CDS
T08542
Name
(RefSeq) integrin alpha-2
KO
K06481
integrin alpha 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03271
Virion - Rotavirus
stru04145
Phagocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04518
Integrin signaling
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
115159162
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115159162
04518 Integrin signaling
115159162
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115159162
09144 Cellular community - eukaryotes
04510 Focal adhesion
115159162
09142 Cell motility
04820 Cytoskeleton in muscle cells
115159162
04810 Regulation of actin cytoskeleton
115159162
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115159162
04515 Cell adhesion molecules [BR:
stru04515
]
115159162
04090 CD molecules [BR:
stru04090
]
115159162
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115159162
Exosomal proteins of bladder cancer cells
115159162
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115159162
CD molecules [BR:
stru04090
]
Proteins
115159162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
Integrin_alpha
Cytadhesin_P30
TM_ErbB1
FN3_IL27B_N
Motif
Other DBs
NCBI-GeneID:
115159162
NCBI-ProteinID:
XP_029564481
LinkDB
All DBs
Position
23:complement(6004734..6046471)
Genome browser
AA seq
1188 aa
AA seq
DB search
MEFNPKRTVLTLLLIQCWSIPRSLSFNVGTAGAKVFSGPAVEEFGYTVKQFRNHQGKWLL
VGSPWSGYNQDRKGDIYKCEIRGSSSGCQRLNLQNSVSISTVKNINVNMSLGLTLTHTAT
EDKFMTCGPLWAQKCGSQYYYPGICAEVNPLFNPLSSFSPALQTCGGPMDIAIIVDGSNS
IYPWPPVVAFLKKLLENLDIGPDNTQASIIQYGVEPFVEFRLNAYKTKDSIIAAAANIPQ
REGLETNTFRAIEFARQNAFLPGNGARPGASKVMVVVTDGESHDKNLRDDVIRKCESEKI
TRFGIAVLGYYIRNDIDTKNLIAEIKSIASTPTDRYFFNVSAEEALLEIAGSLGDRIFNI
EGTGKGGDFQMEMSQVGFSAHQTKKQNMIMLGAVGAYGWSGTVVHYTTQKSDIFPKTAFE
KILEDRNHSSLLGYSVTTLNDGSIEYYVAGAPRSNHTGQVIVYIINGKGQPTVIDSQRGD
QIGSYYGSVLCPLDVDKDGVSDLLLVGAPMFMNEQQKEIGKVHLLSFTKGILSVQGFLKG
PSPVENARFGMCISAVPDLNMDGYSDVLVGAPLEDNNKGVIYVFNGDKKRLRTQYSQRIL
GSKLDPALRYFGRSVDASSDLNDDTIPDVSVGAYGMVVQLWSRGLAVVTARATFNPDTVS
ILSKTCRVSGRLVSCFNTSVCFSATFRPKIPVGPVAVRFNLTLDAELQSSRVTSRGQFRN
SERVMQKDIRVSTGEVCETLEVFVQEAPDFVSSIGLRVDITLQDPDSSPVLDVLSPTAWE
FFIPFSKDCGSDEVCLSDLLLKLKKGEMIPSSSRMLVSFKDKRLSFTVSVTNKKENAYNT
QVTATYSKNLFYASINPPSDGTEVKCTSTKESLTLSCQVGYPALRQNQEVTFGINFDFNL
NQLQTEADVSFEALSDSTEENPSDNQASISIPVHYDAEISLSRESNLNFYVVDMDNEAKT
AVNTFNDIGPEFKFSMKVSTGNFPVSLAYLTVSLPSSTARGNPLLYVTGVKTEPAGEVSC
EVTSLVDPLKISEKPYTASFSKENLMGTEDLNCKTVKCQPMNCVLKDMGIKSDFFVNVTT
RIWNGTFAASSFQSTVLTVSTEIETSEPELLVISHKHLTVGVTISKPGVKGEVPVGVIAG
SVIGGLLLLALVIGLLWKFGFFRRKYKQLMQNTEEDEAETEVLENTAA
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggagtttaatccaaagaggactgttttgacgttgcttttgatccagtgttggagcatc
ccccgatccctatcctttaatgtggggacggcaggagccaaggtattctctggacctgcc
gtagaggagtttggatacactgtgaaacagttcagaaatcaccagggaaaatggttgctg
gttggttctccctggagtggatacaaccaggacaggaaaggagacatctacaagtgtgag
atcagagggtccagttcaggctgccagagactcaacctgcagaactcagtcagcatatca
acagtgaagaacatcaatgtcaacatgagtctggggctaaccctcacccacacagctaca
gaagataaattcatgacatgtggacctctgtgggctcagaagtgtggcagtcagtattat
tacccagggatctgtgcggaagttaaccctctcttcaaccccctgtcttcgttctcacct
gcccttcaaacttgtgggggtccaatggatattgctattattgtggatggatccaacagt
atatatccctggccaccagttgtggctttcctcaagaaactgttggagaatttagatatt
ggaccggataatactcaggcaagtattatacagtacggggttgagccattcgttgaattc
cgtctgaacgcctacaaaaccaaagactcgatcattgcggctgcagcgaacattccccag
agggaaggcctggagacaaacaccttccgggccattgaatttgctagacagaacgcgttc
ctgcccgggaacggggctcgacccggagccagcaaagtgatggtggtggtgacggacgga
gagtctcacgacaagaacctccgagacgacgtcatcaggaagtgtgagagtgagaagatc
acccgctttggtattgctgtccttgggtattacataaggaatgacattgacactaagaac
ctgattgctgagatcaagtccatcgccagtaccccgacagataggtatttcttcaatgta
tcagctgaggaggctctgctcgagatcgccggatctctgggagaccgcatcttcaacatt
gagggtactgggaaagggggtgactttcagatggagatgtcccaagtgggattcagtgcc
caccaaaccaagaagcagaacatgattatgctgggtgcagtgggggcctatggctggagt
ggtactgtggttcactacactacccagaaatcggacatcttccccaagacggcctttgag
aaaatcttagaggacagaaaccatagctcactattaggctactctgtgacgacgctgaat
gatggcagcatagagtactatgtggctggcgctcctcggtccaaccacactggacaggtc
atagtgtacatcatcaacggcaagggacaacccaccgtcatcgactcccagagaggagac
cagataggctcctactacggcagcgtactctgtcctctggatgtggataaagatggtgtg
tctgatctactattggttggagctcccatgttcatgaacgaacagcagaaggagattggg
aaagtccatctcctctccttcactaagggcatcctaagtgtccaggggttcctgaagggt
ccgtccccagtggagaacgctcgttttgggatgtgtatctcagccgtgcctgacctcaac
atggatggctacagtgatgtgttggtgggagccccactggaagacaacaataaaggtgta
atctatgtcttcaacggagacaagaagagactcaggacacagtattcccagagaatcctg
ggctccaagctggaccctgcgttgcggtacttcgggaggtccgtggacgccagctccgac
ttaaacgatgacaccataccagatgtctcagtgggggcttatgggatggtggtccagctc
tggtcccggggtctggccgtggtgacagcgagggcaaccttcaaccctgacacggtcagc
atcctgagtaagacgtgcagggtcagtgggaggctggtgtcctgcttcaacacctccgtc
tgtttcagcgccaccttcaggcccaagatacctgtaggacctgtggctgtcaggttcaac
ctgaccctggatgctgagctccagtcgtctcgtgtcacctccagaggtcagttcaggaac
tcagagagagtcatgcagaaagacatcagggtttccactggggaggtctgtgagacacta
gaggtctttgttcaggaggcccctgactttgtgagctccatcggtctgcgtgtggacatc
actctgcaggaccccgactccagtcctgttctggatgttctcagtcccactgcctgggag
ttctttatcccattctccaaagactgtggctctgacgaggtgtgtttgagtgacctgctc
ttgaagttgaagaaaggagagatgattcccagctcgtctaggatgctggtcagctttaag
gacaagaggctctccttcactgtgtctgtgaccaacaagaaggagaatgcgtacaacacc
caagtcacggccacatactccaaaaacctcttctacgcctccatcaatcctccaagtgat
ggaacagaggtgaagtgcacctccaccaaagagtctcttaccctctcatgccaggtggga
tacccagctttaaggcagaaccaagaggtgacatttggaatcaactttgacttcaacctg
aatcaactgcagaccgaagccgatgtgagctttgaagctctaagtgacagcacagaggag
aacccgtcagacaaccaagcctctatctccatccctgtccactatgacgcagagatctcc
ctctccagggaatcaaatctcaatttctatgtggttgacatggacaatgaagcgaagacc
gcagttaataccttcaatgacatcggtcccgagttcaaattctctatgaaggtctctaca
gggaacttcccagtcagtctggcctacctcacagtctcactgcccagttctacagcaaga
gggaacccattgctgtatgtgacaggagtcaaaacggaacctgctggcgaagtgagctgt
gaagtaaccagcctcgtcgaccctctgaagatcagcgagaagccttacacagcatccttc
tccaaggagaaccttatgggcacagaagatctgaactgcaagacagtcaagtgccagcct
atgaattgtgtcctgaaagacatggggataaagagcgatttctttgtgaatgtgaccacg
cggatatggaacggtacctttgctgcttcatccttccagtccactgtgctgactgtgagc
acagagatagagacctccgagcctgaactgttggtcatctctcacaagcacctgacggtt
ggcgtcaccatcagtaaaccaggggtgaaaggagaggtgcctgtaggcgttattgcgggc
agcgtgattggaggcctgcttctattggctctggtcattggcctgctttggaagtttggc
ttcttccggagaaagtacaagcagctgatgcagaacaccgaggaggatgaggcagagacc
gaggtactggagaacacagcagcgtga
DBGET
integrated database retrieval system