Salmo trutta (river trout): 115159367
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Entry
115159367 CDS
T08542
Name
(RefSeq) PDZ and LIM domain protein 5-like isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
stru
Salmo trutta (river trout)
Pathway
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115159367
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stru04990
]
115159367
Domain-containing proteins not elsewhere classified [BR:
stru04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115159367
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
Zn_ribbon_IS1595
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115159367
NCBI-ProteinID:
XP_029564856
Ensembl:
ENSSTUG00000046781
UniProt:
A0A674EAB0
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Position
23:complement(12481409..12558247)
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AA seq
623 aa
AA seq
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MSSNYSVSLVGPAPWGFRLQGGKDFCLPLTISRLTDGGKAAKARMSVGDVVLSIDGIATN
SMNHLEAQNKIKACTGNLNLTLQKASSVPKADAPKNEPLEIIKPVPITYPATASTFTSPS
PQPGAAYNKTARPFGGGSSVGLVTSSLTAPKVASIPSASSAFTPAAPSSQQPQPPFPLGS
HSRSPAPPIAAPPSSAPPTRPSSGRSPFTTPSSSSSSSPARVTAPSSNPGAPQSSCYNTP
INLYSNANACEVAIGQRRGLLEAQGVVVDQIKEQFNGNRVDPELNHASPLSEASKKRMIE
DTEDWHPRTGTSQSRSFRILAQITGTENDQAQENSTGKKEVVEDALPSAHVTSVKTMTKV
PGAPRNGNGVPPPTFKTPSAQVKPSWPAGGPAGFPKGGAAPSFGRVSNNAPVPRGPDRPA
PQAHPKDQDSLVQRAEHIAAGTRTPMCGHCDKVIRGPFLVAMGMSWHPEEFNCSHCHTSL
VESGFVEERGTVYCAHCYEEFFAPTCTSCKQKVLGEVINALKQTWHVYCFLCASCQQPIR
NNTFHMEDGLPYCERDYYQLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCAVCSTSL
EGQAFFSKKDKALCKKHAHTVKI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaactacagtgtctccctggttggccctgccccctggggcttcagactgcag
ggaggaaaggacttctgtctgcccctcactatctcaaggctgaccgatgggggcaaggca
gccaaagccagaatgagtgtgggagatgtagttctgtcgatcgacggcatcgccaccaac
agcatgaaccatctggaggcccagaacaagatcaaagcctgcacaggcaacctcaacctc
accctgcagaaagcttccagtgtccccaaggctgatgcaccaaagaacgaaccgttggag
atcattaagcctgtgccaatcacctacccagctacagcatccacattcaccagcccctcc
ccccaacccggtgctgcctacaataagacggcccgcccctttggcgggggcagcagtgta
ggtttggtcacttcctccctgaccgccccaaaagtggcctcaatcccttctgcatcgtct
gctttcacccccgctgccccctcctcccagcagccccagcctcccttcccactaggcagc
cactcccgctctccagccccacccatcgcagccccacccagctcagccccacccaccaga
cccagctctggccgttcccccttcaccaccccctcctcgtcctcctcctcctccccggcc
agagtgacagccccctcctccaatcccggtgctccgcagtcctcttgctataacacgccc
atcaacctgtactccaacgccaacgcctgtgaggtggccataggacagaggcggggcctg
ttggaagcccagggtgtggtggtcgaccagatcaaagaacagttcaacgggaacagagtt
gatccagagttgaaccatgcctcaccactcagtgaggccagtaagaagcgtatgatcgag
gacacagaggactggcatcctcgcaccggcacctcccagtccaggtccttcagaatcctg
gctcagatcactggcaccgagaacgaccaagcccaggagaacagcactggaaagaaagaa
gttgttgaggatgccctgcccagtgctcatgtcacatcagtgaagaccatgaccaaagtc
ccaggcgcccccaggaacggtaatggtgtccccccacccaccttcaagaccccctctgcc
caggtcaaaccgtcctggccggctggaggtccagcaggtttccctaagggtggagcggcg
ccctcttttggccgggtcagcaacaatgcaccagtgcccagaggtcctgaccgccctgct
ccccaggcgcaccccaaggaccaggactccctggtgcagcgggctgaacacatcgcagca
ggaacacgcacacccatgtgtggccactgtgacaaggtcatcagaggtccgttcctggtg
gccatgggcatgtcgtggcaccctgaggagtttaactgttcccactgccacacgtctctg
gtggagtcaggcttcgtggaggagaggggaacagtgtactgtgctcactgctatgaagag
ttctttgcccctacctgcaccagctgcaagcagaaggtcctgggggaagtcatcaatgcc
ctgaagcagacctggcatgtgtactgcttcctgtgtgcatcctgccagcagccaatcaga
aacaacaccttccacatggaggatgggctgccatactgtgaaagagattattaccaactc
tttggtaccagttgccatggttgtgacttccccatcgaggccggagacaagtttctggag
gcgttgggattcacctggcatgatacctgcttcgtatgtgcagtctgcagcaccagtttg
gagggccaagccttcttctctaaaaaggacaaggctctgtgcaagaaacacgcccacaca
gtcaagatctga
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