Salmo trutta (river trout): 115159380
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Entry
115159380 CDS
T08542
Name
(RefSeq) serine/arginine-rich splicing factor 9-like
KO
K21123
serine/arginine-rich splicing factor 9
Organism
stru
Salmo trutta (river trout)
Pathway
stru03040
Spliceosome
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115159380
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115159380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115159380
Spliceosome [BR:
stru03041
]
Common components
Common spliceosomal components
SR proteins
115159380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
DUF2457
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
115159380
NCBI-ProteinID:
XP_029564892
Ensembl:
ENSSTUG00000048729
LinkDB
All DBs
Position
23:complement(12983449..12990252)
Genome browser
AA seq
252 aa
AA seq
DB search
MTDGRIYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDSKLRVEYPRSSGAKFSGPMGGGERGEGGGPKGRFGPPTRRSEFRVIVTGLP
PSGSWQDLKDHMREAGDVCFADVQRDGEGVVEFVRREDMEYALRRLDRTEFRSHQGEMAN
IRVHGEHGANYGRSQSRSRSPRGRGYSPPPYKSRGSPPQRYQSPPRRHVSRHSPPARRHP
VTHHSPPPRHYR
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggaaggatctacgtgggaaatcttccaatggatgtccaggagagggacata
gaggatctcttcttcaaatatggaaaaattcgggatatcgaactaaagaataacagggga
accatcccttttgcttttgttcgcttcgaagatccacgggatgcagaagatgctgtctat
ggaaggaatggatatggattcggtgactccaagctgcgtgtagaataccctcgctcctct
ggcgccaaatttagtggccctatgggaggcggagaaagaggagaaggagggggtcctaag
gggaggtttgggcctccaactcggagatctgagttccgggtgatagtgactggcttgccc
ccatcagggagctggcaggacctgaaagaccacatgcgtgaggcaggggatgtgtgtttc
gccgacgtgcagcgggatggtgaaggggtggtggagtttgtccgtcgggaggacatggag
tatgccctgcgcagactggacaggactgagttccgttcccatcagggggagatggcaaac
attcgtgtccacggagaacatggtgccaattatggtcgctcgcagtcccgctccagatcc
ccccgggggcgtggctactcaccacctccttacaaaagcagagggtcccctccacagcgc
taccaatcacctccacggcgccatgtgtcccgccatagcccaccagcgaggcgacaccca
gtaacgcaccacagcccacccccacgccactatcggtag
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