Salmo trutta (river trout): 115159483
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Entry
115159483 CDS
T08542
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
stru
Salmo trutta (river trout)
Pathway
stru03015
mRNA surveillance pathway
stru04261
Adrenergic signaling in cardiomyocytes
stru04382
Cornified envelope formation
stru04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115159483
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115159483
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
115159483
09158 Development and regeneration
04382 Cornified envelope formation
115159483
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115159483
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115159483
03036 Chromosome and associated proteins [BR:
stru03036
]
115159483
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
115159483
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
115159483
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
115159483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115159483
NCBI-ProteinID:
XP_029565100
Ensembl:
ENSSTUG00000013002
LinkDB
All DBs
Position
23:16419642..16432614
Genome browser
AA seq
448 aa
AA seq
DB search
MAGAGGGSSDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEI
ENKSQPQCRSEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI
KLWKISERDKRPEGYNLKEEDGRYIDPNTVTALRVPVFRPMDLMVEASPRRVFANAHTYH
INSISINSDHETYLSADDLRINLWHQEITDRSFNIVDIKPANMEELTEVITAAEFHPHQC
NTFVYSSSKGTIRLCDMRASALCDTHSKLFEEPEDPSNRSFFSEIISSISDVKFSHNGRY
MMTRDYLSVKIWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSVVMT
GSYNNFFRMFDRGQRRDVTLEASREGSKPWQVLKPRKVCADGKRKKDEISVDSLDFNKKI
LHTAWHPQDNIIAVATTNNLYIFQDKGN
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagctggaggtgggagcagtgatgtgcagtggtgcttctcacaggtgaagggg
gccattgatgacgacgttgccgaagccgacatcatatctaccgtggagttcaaccactca
ggggagctgctagccacaggagacaagggtggcagggtcgtcatctttcagcaggaaata
gagaataagagtcagccacagtgccgtagtgagtacaatgtttacagtactttccagagc
catgagcccgagtttgactacttgaagagtttagagatcgaggagaagatcaacaaaatc
cgctggctgccccagaagaacgcagctcagttcctgttgtccactaacgacaaaaccata
aagttgtggaagatcagtgaacgagacaagcgaccagagggctacaacctgaaagaggag
gatggacgctacatagaccccaacactgtcactgcacttcgagtgcctgtgtttagaccc
atggacctcatggtggaagcgagccctcgcagggtgtttgccaatgcgcacacctaccac
atcaactccatctccataaacagtgaccatgagacatatctatccgcagacgacctgcgc
atcaatctctggcatcaggagatcaccgaccgcagcttcaacattgtggatataaagcca
gccaacatggaggagctgacagaggtgattacagcagctgagttccatccacaccagtgc
aacacctttgtctacagcagcagcaagggcaccatccgcctctgtgacatgagggcatca
gcactatgtgacacgcactccaaattgttcgaggagccggaagaccccagtaaccgctcc
ttcttctctgagataatctcttccatctcagacgtcaagttcagccacaacgggcgctac
atgatgactcgggactacctgtctgtcaagatttgggacctgaacatggagaacaggccc
gtggagacgtaccaggttcacgagtacctcaggagtaagctgtgctcgctctatgaaaac
gactgcatctttgacaagtttgagtgctgctggaacggaaatgacagtgtggtgatgacg
ggctcatacaacaacttcttccggatgtttgaccggggccagaggcgggacgtgaccctg
gaggcgtcccgggagggcagtaagccatggcaggtcctgaagccccgcaaggtgtgtgcc
gacgggaagcggaagaaggacgagatcagtgtagacagcctggacttcaacaagaaaatc
ctccacaccgcctggcaccctcaggacaacatcatcgccgtggcaaccaccaacaacctc
tacatattccaggacaaagggaactag
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