Salmo trutta (river trout): 115159491
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Entry
115159491 CDS
T08542
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog isoform X1
KO
K06788
coxsackievirus and adenovirus receptor
Organism
stru
Salmo trutta (river trout)
Pathway
stru03267
Virion - Adenovirus
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
115159491
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115159491
04517 IgSF CAM signaling
115159491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115159491
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
CTX family
115159491
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Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_PDGFR_d4
Ig_C17orf99
Syndecan
Motif
Other DBs
NCBI-GeneID:
115159491
NCBI-ProteinID:
XP_029565119
Ensembl:
ENSSTUG00000016155
LinkDB
All DBs
Position
23:16846476..16855814
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AA seq
393 aa
AA seq
DB search
MSCAHLVFKQGTTESYMYFQNIAVCACLFNVAMVQNVYPCVPSSHPWSSMIGICAITVFL
NAAGSMGMQLTSTGPQTVQRAQGERMTLVCTYTPDPSDTGELDIEWSVVSPDTTQKDQLL
LSYAGGNKYIHGNPGLTKGLDFAAGDPSLGDASLSIAFLSPAHSATYQCKVKKSPGVDMQ
KVSLVVMVRPSVPKCWVEGGEAVGETVSLHCKSSEGSSPLNYAWKRERGGPIPPSATQNR
VTGELLISNHSESFVGIYMCEVTNAVGDERCRVKLTANKPPNRAGVVAGTVVGCLLLIII
LAILIWLLIYKCDARFTRYEKEVSNDIREDVPAPESRPHSRGSSRGASLHPGVSYSQVGM
QQTGHSDRGHTHIPSSSTGYTPVKYDSRYDFAV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtgctcatctagttttcaagcagggcaccacagagagctatatgtattttcaa
aacattgctgtatgtgcttgtctgttcaatgttgccatggttcaaaatgtctatccatgc
gttcctagctctcacccatggtcttccatgatcgggatatgtgcaatcacagtttttctc
aatgcagctggcagcatggggatgcagctgacctctactggtcctcagaccgtccagagg
gcccagggggagagaatgaccctggtgtgtacatacacacctgacccctcggacactgga
gagctggatattgagtggtcagtggtcagcccagataccacccagaaggaccaattgctg
ttgtcctatgcaggtgggaataagtacatccatggtaaccctggtctaactaaggggctg
gactttgctgctggcgacccttccctgggtgatgcgtccctctccatcgctttcctgtca
ccagcccattctgccacctaccagtgtaaagtcaagaagtcaccgggagtggacatgcag
aaagtgtccctggtcgtgatggttcgtccttcggtgcctaaatgctgggtggagggtggg
gaggcagtgggggagactgtctccctgcactgcaagtcatccgaggggtcctctcccctc
aactacgcatggaagagagaaagaggaggtcccatcccaccctcagccacacagaaccgt
gtgactggggagttgttgatcagcaatcactctgagagctttgtggggatttacatgtgt
gaggtgaccaatgctgtgggggacgagaggtgcagagtcaaactgacagctaacaaaccc
cctaacagagcaggagtggtagcgggtactgtggtgggttgtctactgctcatcatcatt
ctggcgatactcatatggctcctcatctacaagtgtgatgcaaggttcacacgctatgag
aaggaagtgtctaacgacatcagggaggacgtcccagccccagagagccggccacacagc
cgaggcagcagccggggcgcaagcctccaccctggggtatcctacagccaggtgggcatg
caacagacggggcactcagatcgaggacacacacacatcccatccagcagcactggatac
acacctgtcaaatatgacagcagatacgacttcgctgtatga
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