Salmo trutta (river trout): 115159493
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Entry
115159493 CDS
T08542
Name
(RefSeq) guanine nucleotide exchange factor VAV2-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04517
IgSF CAM signaling
stru04519
Cadherin signaling
stru04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115159493
04519 Cadherin signaling
115159493
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115159493
09142 Cell motility
04810 Regulation of actin cytoskeleton
115159493
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH3_9
SH2
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
SH2_2
C1_2
PH_10
DH_Alsin
CDC24
PLU-1
Nup88
Motif
Other DBs
NCBI-GeneID:
115159493
NCBI-ProteinID:
XP_029565121
Ensembl:
ENSSTUG00000016325
LinkDB
All DBs
Position
23:complement(16868567..17085338)
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AA seq
889 aa
AA seq
DB search
MEEWRQCGRWLIDCKVLPPNHRVVWPSAAVFDLAQALRDGVLLCQMLHNLSPGSVDLKEI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHHSI
AQIKGIRPFPSEDTALNEDDVYRSLEELADEHDVGEDDIYDCVPCEDDGDDIYEDIIKVE
VRQPMIRYMQKMGMTEDDKRNCCLVEIQETEAKYYKTLEDIEKNYMIPLKQVLSPPDMES
IFVNLEDVIKVHFALLRAIDLNMVSGGNGLGKIFVDFKERLLIYGQYCSHMENAQKILDE
LIATREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELVSHSTDRPERQQL
KEALEAMQDLAMYINEVKRDNETLKKISEFQNSIENLQQVKLEEYGRPKIDGELKVSSIV
NRTKQDRYIFLFDKVVIVCKRKGYCYELKEIIELQSYKMSDDPMNNRDMKKSSGKMWSYG
FYLIHLQGKQGFQFFCKTEDTKRKWMEQFEMAMSNIKPEKATANQHNFQMHTFEKDTNCR
ACKMLLRGIFYQGYYCSHCGTGAHKECLECITICKINPLDTEPGLPPSGPKMVAVRNYHG
TPVPPGKPPLSFQTGDFIELLKGEPDTTWWEGKLIQTQKSGFFPNSCVKPCLDPKPLFQS
FPSRQSSRETDYYAYPWFAGNMERTQADNLLKSHSSGTYLIRERTAEAERFAISIKFNDE
VKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKSRERGPAS
RASTRSPGEPIPAAIGASYNFSFLSPQGLNFSSSQSSAPFWSVFTPRVVSTAVARYNFAA
RDMRELSLREGDIVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtggcggcaatgcgggcggtggttgatagactgcaaggttttgcccccaaac
caccgggtcgtgtggccttctgcggccgtgttcgacttggcacaggcgctacgagacgga
gtgctcttgtgccaaatgttgcacaacctctcaccggggtctgtggacctaaaggagatc
aacttcagaccccaaatgtcacagtttctgtgtctgaagaacatccggacattcctcaag
gtgtgccacgacaagtttggcctgcgcaacagtgagctgtttgacccatttgacctgttt
gatgtcagggacttcggcaaggtgatctcagccctgtccaggatctcccaccacagcatt
gcacagatcaaagggatcaggccctttccttcagaggacactgctctaaatgaggatgat
gtgtaccggagtcttgaggagctagcagatgagcatgacgtgggggaggatgatatctac
gactgtgttccctgtgaggacgatggagatgacatctacgaggacatcatcaaggtggaa
gttcgacaacccatgatcagatacatgcagaaaatgggcatgacagaagacgacaagaga
aactgctgcttagtggagatccaggagactgaggccaagtactacaagacgctggaggac
attgagaagaattatatgatccctttgaagcaagttctcagtccaccagacatggagtcc
atctttgtaaatctcgaggatgtgattaaagtccactttgctctgctgagggccatcgac
ctcaacatggtgagcggaggcaacggtctggggaaaatcttcgtagacttcaaggaaaga
ttgttgatctacggccagtactgcagccacatggagaatgcccagaagatactggatgaa
ctcatcgccacgcgggaggacgttaagatgaaagtagaggagtgcactatgaaggtgcaa
gagggcaagttcaagctccaggacctgctggtagtacccatgcagcgggttctcaagtac
cacctcctacttaaggagctggtgagtcattcaactgaccgacctgagagacaacagctc
aaggaggcgttggaggccatgcaggacctggctatgtacatcaatgaagtgaagagagac
aatgaaaccttgaagaagattagtgaattccagaactccatcgaaaaccttcagcaggtc
aaactggaggagtatggcagaccaaagatagatggagagctcaaggtgtcctccatagtc
aaccgaacaaagcaggaccggtacatattcctgtttgataaagtggtcatagtgtgcaag
aggaaaggctactgctatgaactgaaggagatcattgagctgcagtcgtataaaatgtct
gatgaccccatgaacaacagggacatgaagaagtcgagtggaaaaatgtggtcctatggc
ttctacctgatccatctgcaagggaagcagggtttccagttcttctgtaaaacagaggac
accaagaggaaatggatggagcagtttgagatggccatgtcaaacatcaagccggagaaa
gccacggccaatcagcacaacttccagatgcacacgtttgagaaggacaccaactgccga
gcctgcaagatgctgctgagggggatattctaccaggggtactactgttcccattgtggg
actggagcgcacaaagagtgtctagagtgcatcaccatctgtaaaataaatccactcgat
acagaacctggactaccgccttcaggtcctaagatggtggctgtgaggaattatcacggg
acgcctgttcctccagggaagcctccactctccttccagacaggcgacttcatcgagctc
ctgaagggggaacctgacaccacctggtgggagggaaagcttatccaaacccagaagagt
ggcttctttcctaacagctgtgtaaagccttgtttggaccccaagcctttgttccagtcc
ttccccagccggcagtcctcaagggaaacagactactatgcatacccatggtttgctggc
aacatggagcggacacaggctgacaacctgttgaagtcccacagcagtgggacatacctg
atcagagagaggactgctgaggcagagaggttcgccatcagcatcaagttcaacgatgaa
gtaaagcacattaaagtcattgagaaagacagctggatccacatcactgaggctaagaag
tttgagagtctactggagttggtggagtactatcagtctcattcgctgaaggagagtttc
aagctgctagacacgacattacgatatccctacaaatctagagaacgggggccggcgtcg
cgggccagcactcgctctccaggtgagcccatccctgcagccattggtgcttcctacaac
ttctccttcctcagtcctcagggtctcaacttctcctcctctcagagctcagctcccttc
tggtcagtgttcacaccgagggtggtcagcacagcggtggccaggtacaattttgcagca
cgggacatgagggagctgtcactcagagaaggagacattgtcaagatctacagcaagatc
ggaggagaccagggctggtggaagggagaggccaatggcaggattggctggtttccttca
acatatgttgacgaagaaggagttcagtga
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