Salmo trutta (river trout): 115159612
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Entry
115159612 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180-like
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115159612
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115159612
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115159612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
Yippee-Mis18
Baculo_IE-1
At4g08330
FYVE
Motif
Other DBs
NCBI-GeneID:
115159612
NCBI-ProteinID:
XP_029565353
Ensembl:
ENSSTUG00000016963
LinkDB
All DBs
Position
23:complement(22795377..22804758)
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AA seq
540 aa
AA seq
DB search
MDNPGAVAMLRCRKCRKGFVDTTSLHPIVPDDDTTAAGTCSVWHINVDTLPEWILTSVHQ
AQWTVGKLNCENCGARLGGFNFLNNTKCPCGQESTVHLSKSRVDQDHKRYLHVVRPQTTR
GRGGPGCLKGEPGGSHSEQDRSEVGEDFLVGSQLCCTSVSRLNAESQPITTHPDAFFQLA
DIRATQSVPLSSPSIVSHTKSGARGRLEPSCSSGSQTGPVEMTEGEVRTGIEQLPHSPVL
SYTPHLFATSIIRSPTCLSPLTREAPGSRLLSLRGPDVSHIPGEQEGAVEEERRGTPTEL
QAQLVANNASPALQRFSKREKNRLKSQRRKQRKKERWLHSQEQSVTGLLTDSEEVDREGY
TCAVCLDVYFSPYSCHPCGHIFCEPCLRTLAKNRPANTPCPLCRTLISHTLFQKELNQTA
KTFFPKVYHSRKHNFQKANCAKWPLPNCRKRFRIFWGYQGQVAPGRWWHFAPAGFALDAL
DLADMRGWFFDIDLVIIYIHSLNWILALLMYDQWARSVKDFPQVINMKTRLLWSRRRLNS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacaacccaggggcggtggcaatgctccgctgcaggaagtgtcgtaaaggctttgta
gacacaacaagcctgcatccgatagtgcctgatgatgacacaacggcagcaggtacatgc
agcgtctggcacattaacgttgatacactgccagagtggatactgacgtcagttcaccag
gcccagtggacagtggggaagctgaactgcgagaactgtggtgctcgcctgggtggcttc
aactttctcaacaacaccaaatgcccctgtggtcaggagtccaccgtgcaccttagcaag
agtcgggtcgaccaggaccacaaacgctaccttcatgtggtcagaccgcagacgacgaga
ggtaggggaggaccgggctgcctgaagggcgagccggggggttctcacagtgagcaggac
aggtcagaggtcggggaggactttctggttggctcacagctctgctgtacttctgtgtcc
cgccttaacgctgagagccaaccaatcacaacacacccagatgcctttttccagttggct
gacatcagagccacccaatcagttccattgagctcccccagcattgtttctcatacgaag
tctggtgcgaggggcaggttggaaccctcctgtagctctggctcccagactggccctgta
gagatgactgagggagaggtgaggactgggatagagcagctgccccattcacctgttttg
tcctacacccctcatctatttgcaactagtattattaggtcacctacctgcctatcacct
ctgactagagaggcccctggttctcgtcttctctccctgagagggccagatgtctcccac
atccctggagagcaggagggggccgtggaggaggagagaaggggaacccccacagagctc
caggcccagctagtagctaacaatgcttctccagccctacaaaggttcagcaagagagag
aagaaccggctgaagagccagaggaggaaacagaggaagaaagaacgctggctccactcc
caggaacagagtgtgacagggctgctaacagacagtgaggaggtggacagagagggctac
acctgcgctgtgtgcctggatgtctacttcagtccctatagctgtcacccctgtggccac
atcttctgtgagccctgcctccgcacgctggccaagaaccggccggccaacaccccctgt
cccctctgccgcaccctcatctcacacacactcttccagaaagagctcaaccagacagct
aagacttttttcccgaaggtctaccactcacggaaacacaactttcaaaaagccaactgt
gctaaatggcctcttcccaactgccgaaaacgtttccgcatcttttgggggtaccagggg
caggtggctccagggaggtggtggcactttgccccagcaggcttcgccctggatgccctg
gacctggccgacatgcgcggctggttcttcgatattgacctggtcatcatctacatccac
tctctcaactggatactggccctgctgatgtatgaccagtgggcccgctctgtcaaggac
ttccctcaggtcatcaacatgaagacccgcttgctttggagtcgtcgacgtctcaacagt
taa
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