Salmo trutta (river trout): 115159666
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Entry
115159666 CDS
T08542
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
stru
Salmo trutta (river trout)
Pathway
stru04010
MAPK signaling pathway
stru04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115159666
04020 Calcium signaling pathway
115159666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stru04040
]
115159666
Ion channels [BR:
stru04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115159666
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
115159666
NCBI-ProteinID:
XP_029565468
Ensembl:
ENSSTUG00000044648
LinkDB
All DBs
Position
23:complement(25646016..25900657)
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AA seq
2504 aa
AA seq
DB search
MERRAPNYSKWAERRSTVVYAMRSATFGSWRMLTLGAEYSSWAQSPESLRQRQAVISENA
EEMESIDIDPSWREQQMDVPQQYDAILHLDERAASGGSRGNHNIIRTHEALNSTPWSKSN
RMARFAEGLPTRYGTGGGGGGRGAPGAGRGGARAGGPPGGQRMYKQSMAQRARTMAIYNP
NPVKQNCFTVNRSLFIFREDNLIRKYAKRITEWPPFEYLILATIIANCIVLALEQHLPAN
DKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILAT
VGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGMLLFFAILMFAIIG
VEFYMGKFHSTCFTVDTGERAAAFPCGTEAPARMCPNGTECTEYWIGPNYGITNFDNILF
AVLTVFQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKE
RERVEKRQDFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDENAEEKSPLDGAWYKRKH
NLPVLKRGKVKKRKNDLIGAEEGEDHFTDMSSVAAPGSPFGRASVKSSKLESSSYFRRKE
RRMRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYLAEFVFLGLFLSE
MSLKMYGLGARNYFHSSFNCFDFGVIIGSILEVVWSMIKPGASYGISVLRALRLLRLFKF
TKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEEETPTTNFDT
FPAAILTVFQILTGEDWNAVMYHGIESQGGVRRGMFSSVYFIVLTLFGNYTLLNVFLAIA
VDNLANAQELTKDEEKQEEEANKKLALQKAMEVKEVSPMSAANISIAAFVKQNRDALSRS
SSVSSVHSPVSLLQHTGKEQQRANKIMSVWEQRTNQLRRNNLRASSEALFNELDPEERLR
VSSALHLRPDMKTHNDRPLVVEPGNGDKPRPPEEDRDGADPQQERGDPHGPQPRKHYRHR
ERNGENGESRHHTHHSHSRDHYHPDGPRSKEGKGERSHSREGGQGHRHHHQAGSPEEGVN
GGGEGREDRHHHSDRQENGALANRDRLESRGRGHREENGERRKQRSRIVRAQSTLDGDEC
RENGERNGDGDQGHRQTDSQGETLATSPVQPPAGLQAGEKQEDADNQKNSHRASQAGLNS
NTVHIPVTITTPSRETTIVPMNSVDCESLPLNEEKKDLEEELKNGPEHILPYSSMFVFGQ
TNPVRRLCHYVVNLRYFEMCILSVITMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFT
FEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDES
KGLEKDCRGKFLDYDGDEVAAQDREWRKYEFHYDNVLWAFLTLFTVSTGEGWPMVLKHSV
DATYEDEGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSECSLEKN
ERACIDFAINAKPLTRYMPADKQSFQYKMWQFVVSPPFEYSIMTMIALNTVVLMMKFHGA
PELYEAMLKYLNIVFTALFTLECILKIIAFGPLNYLKAAWNVFDFVTVLGSITDILVTEI
KTDKLINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAII
GMQVFGNIELNEESAINHHNNFQTFFQALMLLFRSATGEAWHEIMLSCLSNRPCDKLSGS
GGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEFIRVWA
EYDPAACGRMTYLAMYEMLRHMSPPLGLGKKCPPRIAYKRLVKMNMPIADDNTVHFTSTL
MALIRTALEIKLASGVLAQRLCDADLRKEISRVWPNLPQKTVDLLVTPYKNDEFNELLCP
FAVVNRELTVGKVYAALMIFDYYKQNRAKRLEQQLGLDFTGTIKNNKGPAFFRPMPMTHM
QEEGTTVSRANPLPSSQPEPESQPEPLPSTTSLTNGDAVPSTRSPIKESGEQLSQEGQRS
SSRKRILQRGQSEDVPYYNKPQESVEMRQVENGADLGGYSGLDGHGRAASMPRLDSQYYR
NPPRHLPGTYLAPIADISPIRRSVSTLASQCPQEMSLRDYTLERPSQAQAQASSAPGQAQ
DRPHHHHHHRCHRRRDKKQKSLDRATSVQPSSTACSPVDPPLEGLIRERARERDRGRPHE
RRHHSAAGVTKRYYSCERYVGREHCHTKSAGPSRSTSPGETHDLGFFKQSIGISKGSQVV
LTFGSSPSCRGRRQLPQTPLTPRPAVAYKTGNSLPMQFCATGHQSFLSRGLSERNAMLES
PPISVTLIGSDPNLSPCPRNAPPRRLPEEPDDFQDAVSNHGGSHSPRIIASASHGAAGPS
SAPAPQGRGGIPNGYHFTLGVNAVSSSSPRGTGSFREKEEDDWC
NT seq
7515 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagggccccaaactactccaaatgggcggaaaggcgatccactgtggtttat
gcaatgcgctctgccacattcggctcgtggaggatgctgactttgggcgcggaatacagc
tcatgggcccagtctcctgaaagccttcgtcaacgacaggcagtgataagcgagaacgct
gaagaaatggaaagcatcgacattgacccgtcatggagagagcagcagatggacgttcct
caacagtatgatgccatcctgcaccttgacgagagagcagcttcaggagggagtcgtggt
aatcataacatcattcgtacacacgaagccctcaatagcacgccatggtccaagtctaac
agaatggctcgcttcgcagaaggtctacccacccgctatggaactggaggaggtggagga
ggcagaggtgcgcccggcgcaggcagagggggcgcccgggcgggtggtcctccaggcggc
caaaggatgtacaagcagtcgatggctcagagagccaggacaatggccatatacaaccct
aaccctgtcaaacagaactgcttcactgtcaaccgatccttgttcatttttcgagaggac
aatctcattaggaagtatgctaagcgaataaccgaatggcctccgtttgagtacttgatc
ctggccaccatcatcgccaactgcatcgtactggctctggagcagcacctaccagccaat
gacaagacccccatgtcagaacgtctggatgacacagagccctactttattggaatattc
tgtttcgaggctggcattaagattatcgccttgggctttgcatttcacaaaggctcgtac
ctccgcaacggctggaacgtaatggactttgtggtcgtcctcactgggatcctggccacg
gtgggctcagactttgacctgaggactctgcgagcggtgagagtactgagaccactcaaa
ctggtgtctggcatccccagtcttcaggtggtgttgaagtctatcatgaaggccatggtg
cctctgctccagataggcatgctgctcttcttcgccatactcatgtttgccatcattgga
gtggagttctacatgggcaagttccactccacctgcttcactgtcgacactggtgagcga
gcagcagcgttcccctgtggtacggaggccccagccaggatgtgtcctaatggtaccgag
tgtacagagtactggatcggccccaactacggcatcaccaactttgacaacatcctgttt
gccgtgctcactgtcttccagtgcatcaccatggagggatgggtggacatcctctacaat
gctaacgatgcctcggggaacacctggaactggctctacttcatccccctgatcatcatc
ggatccttcttcatgctcaacttggtcctgggtgtcttatcaggggagtttgccaaagaa
agagagcgtgtggagaagaggcaggactttctaaagctgcgtagacagcagcagatagag
agagagctgacgggatacctggagtggatatgcaaggcagaggaggtgctgctggaggag
gaggatgagaacgcggaggaaaagtcccctctggacggtgcgtggtacaagaggaaacat
aacctcccagtgttgaaacgaggcaaggtcaagaagcgtaagaatgacctgattggtgct
gaggagggagaggatcacttcactgacatgtcctctgttgccgccccaggctctccgttt
ggccgggccagcgtgaagagcagtaagctggagagctcgtcctacttccgccgaaaggag
aggagaatgcgtttcttcatccgtcgcatggtcaaagcccagagcttctactggatagta
ctgtgtctggtgggcctcaacacactgtgtgtggccatcgtccactacgaccagcctgag
tggctcaccactgccctctacctggcagagtttgtgttcctgggtctgttcctgtctgag
atgagcctgaagatgtacggcctgggagccaggaactacttccattcctctttcaactgc
ttcgactttggtgtgataatagggagtatacttgaggtggtgtggtctatgatcaaacca
ggggcatcctatggcattagtgtgctgagggctcttcgtctgctcaggttattcaaattt
accaagtactggaactccctgaggaacctggtagtgtctcttctcaactcaatgaagtcc
attatcagcttgctcttcctcctcttcctcttcattgttgtctttgccctgctgggcatg
cagctcttcggaggacagtttaattttgaagaggagacgccgacgaccaacttcgacact
ttcccagcggccattctcaccgtcttccagattctgactggcgaggattggaatgcagtg
atgtatcatggtattgagtcccagggaggcgtacggcggggaatgttctcctcggtctac
ttcatcgtcctcacactctttggaaactacacgctcctgaacgtcttcttagctatcgcc
gtcgacaacctcgccaatgcacaggagctcaccaaggatgaggagaagcaggaggaagaa
gccaataagaagctggccctgcagaaggccatggaggtgaaggaggttagccccatgtca
gcagccaacatctctatcgctgcttttgtaaagcaaaatcgagatgcactctctcgcagc
tcgtccgtctccagcgtgcattcaccggtttcacttcttcaacacactggtaaggagcag
cagagagccaataagataatgtcagtgtgggagcagcgcaccaaccaactgcgtcgaaac
aacctgagagccagctccgaggctctgttcaacgagctggaccccgaggagcgtctgcgt
gtctcctccgccctccacctgcgccccgacatgaagacccacaacgaccgccccctagtg
gtggagccaggtaacggggacaaaccccgaccccccgaggaggacagagacggagcagac
ccccagcaagagagaggagacccccacggtccacagccacgcaagcactaccgtcaccgg
gaaaggaacggggagaatggggagagcaggcatcacacccaccacagccacagtagggac
cactaccacccagacgggccccggtccaaagagggcaagggggagaggagccatagtcga
gagggggggcagggccacaggcatcatcaccaggctggatccccagaggagggggttaac
ggagggggagagggaagggaagaccgccaccaccactccgacagacaggagaacggggcc
ctggctaacagggacagactggagagcaggggccggggccacagggaggagaacggagaa
aggaggaagcagcgctcacgcatagtcagggcccagtcaacactggatggagatgagtgc
agagagaacggagagagaaatggagacggagaccaaggacacaggcagaccgactctcaa
ggggagaccttggccaccagtcctgtgcagcctcctgcaggtctgcaggctggagagaag
caagaggatgctgacaaccagaagaacagccacagagccagccaggcaggcctgaacagc
aacactgtccacatccctgtcaccatcaccaccccatccagagagaccaccatcgtaccc
atgaatagcgtagactgcgagagcctcccactgaatgaggagaagaaggacttggaggag
gagctgaagaacggccccgaacacattctcccctacagctccatgtttgtgtttggacag
accaacccggtgcgtcggctgtgccactacgtggtgaacctgcgctactttgagatgtgt
atcctgtcggtcatcaccatgagcagcatagccctggccgcggaggaccctgtgcaggcc
aatgcaccacgcaacaatgtgctcaagtatctggactatgtcttcacaggagtgttcacc
tttgagatggtgattaagatgatagacctgggactgctcctccatcctggttcttacttc
cgggacctgtggaacatcctggactttattgtggtcagtggagctctggtggccttcgcc
tgctcaggaactaaaggcaaggacatcaacaccatcaagtctctcagggtgctgcgagtt
ctaaggcctctgaagaccatcaaacgactgccaaaactcaaggctgtgtttgactgcgtg
gtcaactctctgaagaacgtgctcaacatcctcattgtctacatgctcttcatgtttatc
ttcgctgtcatcgctgtgcagctcttcaagggcaagttcttctactgcaccgacgagtct
aaaggtctggagaaggactgcaggggtaagtttctggactatgacggtgatgaagtggcg
gcccaggatcgtgagtggaggaagtatgagttccattatgacaatgtgctgtgggccttc
ctcaccctattcaccgtctccaccggggagggctggccaatggtcctaaagcattctgtg
gatgccacctatgaggatgagggtcccagcccaggcttccgtatggagacctctatcttc
tatgtggtctactttgtggtctttcccttcttcttcgtcaacatcttcgtggctttgatt
atcatcaccttccaggagcagggagacaaggccatgtcagagtgtagtctggagaagaac
gagagagcttgtattgactttgccatcaacgccaagcctctgacgcgctacatgccagca
gacaagcagtcgttccagtataagatgtggcagtttgtggtgtcgccgccctttgagtac
tccatcatgaccatgatcgcactcaacactgtggtgctgatgatgaagtttcacggtgct
ccggagctgtatgaggccatgctgaagtacctgaacattgtgttcacagctctcttcaca
ctagagtgcatcctcaagatcatcgctttcggaccactgaattacctgaaggcagcttgg
aacgtgtttgactttgtgacagtattggggagtatcacagacatcttggtcacagagatt
aagacggacaagctgatcaatctgagtttcctgaggctgttcagggcggccaggctcatc
aagctgctgaggcagggctacaccattcgcatcctgctatggacctttgtccagtccttc
aaggccctaccttacgtctgcctcctcatcgctatgctcttcttcatctacgccatcatc
ggcatgcaggtgtttggaaacattgagctgaatgaggaatcagccatcaatcaccacaac
aacttccagaccttcttccaggctctgatgcttctgttcaggagtgcaacaggtgaggcg
tggcatgagatcatgctgtcgtgtctgagtaaccgtccatgtgataagctgtcagggtcc
ggagggaaggagtgcggcagtgactttgcttatttctactttgtctccttcatcttcctc
tgctcctttctgatgctcaatctgtttgtggcggtcatcatggacaactttgagtacctg
accagagacgcctctatcctggggcctcaccacctggacgaattcatccgtgtttgggcc
gagtacgaccctgctgcctgtggccgtatgacctacctcgctatgtacgagatgctccgt
cacatgtcccctccgctgggtttgggaaagaaatgcccgcccagaatcgcctacaagcga
ttggttaagatgaacatgcccattgccgatgacaacacggtgcacttcacgtccactctg
atggcgctcatccgcactgctctggagatcaaactggcatctggagtcctggcccagcgt
ctgtgtgacgctgacctgaggaaagagatctccagagtctggcccaacctgcctcagaag
actgtcgacctgctggtcacaccatataaaaatgatgagttcaatgagcttctttgcccc
tttgcggttgtaaaccgagagctgacagtggggaaggtctacgctgccctcatgatcttt
gactactacaagcagaaccgggccaagagactggaacagcaactgggactggacttcaca
gggacaattaagaataataagggcccagccttcttccgccccatgcccatgacccatatg
caggaggaggggacaacagtctccagagccaatcccctgccatcctcccaacctgaacca
gagtctcagccagagcccctgccatccaccacctctctaactaatggggatgcagtacca
agtactagaagtcccataaaagagtcaggagaacaactgtctcaggagggccagcggtcc
agcagtagaaaaaggattctacagaggggccagtcagaggacgtgccctactacaacaaa
cctcaggaatcagtggagatgaggcaggtggagaacggtgctgatttagggggctactct
ggactggatggccatggcagagcagcctccatgccaagactggactcccagtactatcgg
aaccctcctcgtcacctacctggaacctacctggcacctattgctgacatcagtcctatc
aggcggtcggtgtccacgttggcttcccagtgcccccaggagatgagtctgagagactac
accctggagcggcccagccaggcccaagcccaggcctcctcagccccaggtcaagcccag
gacaggccccaccaccatcaccaccaccgctgtcacagacgcagggacaagaagcagaag
tcacttgacagggcaaccagcgttcagccttctagtacagcatgttcgcctgttgaccct
cctttggagggcttgatcagggagcgggcgagggagcgtgaccgtggccggcctcatgag
aggaggcaccactctgcagccggggtgacgaagcgttactactcctgtgagcgctatgta
ggcagggagcactgccacaccaagtcagctggccccagccgctccacctcccctggagag
acccacgacctaggcttcttcaagcagagtatcgggattagtaaaggcagccaagtggtc
ctaacctttggatctagcccatcctgccgtgggcgcagacagctcccccagacccccctg
accccccgccccgccgtggcctacaagactggaaactccttgcccatgcagttttgtgcc
acggggcaccagtcctttctcagtcgtggactctcggaacgtaacgccatgctggaatca
ccccccatatccgtcaccctcattggctcagacccaaacctgagcccctgtccacggaac
gcccctccacgcagactccctgaggagcctgacgacttccaggatgctgtgagcaaccat
ggagggagccactcccctaggatcattgcctcagcctcccatggggctgctgggccctct
tctgcacctgccccacagggtcggggtgggatcccaaacgggtaccacttcactcttgga
gtcaatgccgtttcaagctccagccccagagggactgggagtttccgtgagaaggaagag
gatgactggtgctag
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integrated database retrieval system
