Salmo trutta (river trout): 115159740
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Entry
115159740 CDS
T08542
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115159740
03041 Spliceosome [BR:
stru03041
]
115159740
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115159740
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115159740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Motif
Other DBs
NCBI-GeneID:
115159740
NCBI-ProteinID:
XP_029565626
Ensembl:
ENSSTUG00000041520
LinkDB
All DBs
Position
23:29039673..29046995
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AA seq
390 aa
AA seq
DB search
MMDDETPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA
ASSLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIKAAFAPFG
RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK
ATYETNTKHLSFEEVVNQSSPSNCTVYCGGVTTGLTEQLMRQTFTPFGQIMEIRVFPDKG
YSFVRFNSHEGAAHAIVSVNGTSIDGHVVKCYWGKETTDMVSPMQQVQMPQVRPQQNKIG
FAAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAWNQQGFNHLQAGAGWTGVGAVS
NGGVVEPGQGVNGTVLANQSGMGTAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgacgaaacacccaagaccctgtatgtggggaacctgtcccgggatgtgact
gaagccctcatcatgcagctgtttggacagatcggcccctgcaagagctgtaaaatgata
gtagacacggcaggtaatgacccatactgctttgtggagttctacgaacacaggcacgct
gcctcgtcactcgcagccatgaatggtcgtaaaataatgggtaaggaggtcaaggtgaac
tgggccacaacccctagcagccagaagaaagacacaagcaatcacttccatgttttcgtt
ggagacctcagtcctgaaatcaccacggatgacatcaaagctgctttcgccccctttggg
aggatatctgatgctcgggtggtgaaagacatggctactggcaaatctaaaggctatggc
tttgtgtccttcttcaacaaatgggatgcagagaatgccatccaacagatgggaggtcag
tggttgggaggacggcagatcaggactaactgggccaccaggaagccccctgcgcccaaa
gccacctatgagacaaacaccaaacacctgtcgtttgaagaggttgtgaaccagtccagt
cccagcaactgtactgtctactgtggaggtgtcacaacaggcctcacagagcaactgatg
aggcagaccttcacccccttcggtcagatcatggagatcagagttttcccagacaaaggc
tactcatttgtgaggttcaactcccacgagggagcggcccacgccatagtgtcagtgaac
gggacgtccatagatggtcacgtggtgaagtgttactgggggaaagaaaccacagacatg
gtcagccccatgcagcaggtacagatgcctcaggtaagaccgcagcagaacaaaataggg
tttgcagcgcagccctacggccagtatgcccagtggtacggtaacgcccagcagattggc
caatacgtcccaaacgggtggcaggtgcccacctacggagtctatggacaggcctggaac
cagcagggattcaaccatttacaggcgggtgcagggtggacgggcgtgggagccgtcagt
aacggcggtgtggtggagcctggacagggagtcaatgggactgtgctggccaaccagtcc
ggcatgggcaccgctggctaccacacccactga
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