Salmo trutta (river trout): 115159747
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Entry
115159747 CDS
T08542
Name
(RefSeq) transcription factor 7-like 1-B isoform X1
KO
K04490
transcription factor 7-like 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru04310
Wnt signaling pathway
stru04520
Adherens junction
stru04916
Melanogenesis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
115159747
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115159747
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
115159747
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115159747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115159747
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
115159747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
115159747
NCBI-ProteinID:
XP_029565633
Ensembl:
ENSSTUG00000042938
UniProt:
A0A674DHL0
LinkDB
All DBs
Position
23:complement(29521880..29548578)
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AA seq
621 aa
AA seq
DB search
MPQLDGGGGDDLGANDELISFKDEGEQEEKTAENVSSERDLDDVKSSLVNETENNSSSSD
SEQAVSHRRPQHHIPDWESYVRQREFVAEALRRQQHDSGLFKASLYAGYPLLMIPDLGNL
ANLGHLGNLGNPYLSPGVLSPGARTYLQMKWPILDVPGTSALKDPRSPSPAHMSNKVPVV
QHSHLSPFSPLLSYSPDPFPPRTPPPHLSADTGLPPTPHPAELSPYYPLSPGSMEHMTHP
LSWLQGQSMYGIPVGGFRPSYPAALALNSSMSSFVSSRFSPHMVPPPQTSVPHPAIVSTA
IKQEPRDSNQHGRCAVSMGDREKEEKKPHVKKPLNAFMLYMKEQRPKVVAECTLKESAAI
NQILGRRWHTLSREEQSKYYDMARKERQLHSQLYPGWSARDNYGKRKKRKRDGRPETAPE
GQMTHPQSAAPEEHFSAQLKKSCVSYGTQERPSVSHTHLTHTHLSQASPASSLDSPSTPT
TALASPAAPAPTHTEHSHSEHTHPEQVQPLSLTTKPPRLQSHRDTHGQAYTHIQSHTHPH
LLTLTHLPPTPNTSSSSSPSSHPPFSLHMSSSSKQTPPLLSRPIPFASGLAPPTSINEST
MSSHHAMLQSQPLSLVTRNNN
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagctggacggaggaggaggagatgatttgggagccaacgacgagttgatctcg
tttaaagacgagggggagcaggaggaaaagactgccgagaatgtgtcctctgagcgggac
ctggacgacgttaagtcttcactggtcaacgagacggagaacaacagcagttcgtctgac
tccgagcaggcagtcagtcatagacgtccccagcatcacataccggattgggagagttat
gtcagacagagagagttcgttgcagaagctctgaggagacagcaacacgacagtgggttg
ttcaaggcatctctgtacgctggctatcccttactgatgatccctgacctgggtaaccta
gccaacctgggccacttggggaaccttggcaacccctacctttctcctggagtcctctca
cctggcgccaggacgtatctgcagatgaagtggcccattctggatgttcctggaacctct
gctttaaaagaccctcgctctccctcccctgctcacatgtccaataaggtaccagtggtg
cagcatagtcacctgtcccccttctccccactcctgtcctacagtccagaccccttcccc
ccacggacaccccctcctcacctctcagctgacacgggtcttccccccaccccccaccca
gcagagctctctccttactaccctctctctcctggaagcatggaacacatgacacacccc
ctgagctggctgcagggccagtccatgtatggtattccagtgggggggtttagaccatcc
taccctgcagctctcgccttgaactcttccatgtccagctttgtgtccagtcgtttctca
ccccacatggtcccgcctccccagacgtcagtcccccaccctgccattgtttccacggcg
atcaaacaggaaccgagagacagcaaccagcacgggaggtgtgctgtgtctatgggggac
agagagaaggaggagaagaagcctcatgtgaagaagcctctgaatgcctttatgctgtac
atgaaggagcagagacccaaggtggtggctgagtgcaccctgaaggagagcgctgccatc
aaccagattctgggacgcaggtggcacactctgtctcgtgaggagcagtctaagtactat
gatatggcccgcaaggagagacagctacactcccaactctaccctggatggtcagctaga
gacaactacgggaagaggaagaaaaggaagagagatggcaggccagagactgctccagag
ggacagatgacacacccccagtcagctgctccagaggagcacttctccgcgcagctcaaa
aagtcgtgtgtgtcgtatggaactcaggagagacccagtgtgtctcacacacacctgaca
cacacacacctgtcccaggctagtcccgcctcctctctggactctccatccacgcccacc
actgctctggcctctcctgccgctcccgcacccacacacactgaacactcacactccgag
cacacacatcctgagcaggtccagcccctctccctcaccaccaaaccccctcgtctgcag
tcacacagggacacacacggtcaggcttacacccacatccagtctcacacacatccacat
ttattaactctcacacacctcccccctacccccaatacctcttcatcttcatccccctcc
tctcatcccccattttctctccacatgagctcatccagcaaacagactccacctcttctg
tctcgaccaatcccctttgcctctggcttagctcctcccacctctatcaacgaatcaaca
atgagctcccatcatgccatgctccagtcccagccactctccctcgtcactagaaataat
aattaa
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