Salmo trutta (river trout): 115159755
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Entry
115159755 CDS
T08542
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
stru04054
]
115159755 (nlrc3)
Pattern recognition receptors [BR:
stru04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
115159755 (nlrc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
115159755
NCBI-ProteinID:
XP_029565648
Ensembl:
ENSSTUG00000017655
LinkDB
All DBs
Position
2:complement(61011467..61034129)
Genome browser
AA seq
1135 aa
AA seq
DB search
MERNTHYNSILDRNKRIAWQEDCYVDLQSTPTSTSTKGEMEDVGWIQKHQGHLQRFITTP
LLEGALSHMRKLELLSQGEEAQVQAGGQLQERVGTLTSILASMDPQGSNALQAFLENSDS
QMYRLITMHDPMVQEHKEALLLQYPTPSDSLSPGPCSPEFSSSRILLLVDGLSDLQQKEH
DLMQVEATRGARRHHVRQLALAKLLEPLTRVSLPPRVSLTVGVAGIGKSTLVGHFVRLWS
RGEICTDVSFVLPFAFWELNTGEKLSAERLVKLAFPHMTDPSLVLSGTCRTLLIFDGLDE
FRCPLDFSETVPCTDPKKEVSVDDLVTNIIRGNLLPEAAVWVTSRPAVASLIPGGLVDRL
TEIPGFSPKEIRLFLSHNFPKGDTASQIWTHLESNKIFMVMSYMPCICWIVAVTFGYLLE
SGWQEGLPRTCTELYSHFCAMRAEAGEPRGREPIKMDQLNGNNRKLLGSLGRLAFYGLLK
HKYTFSEQDMRAYGVDLPSTQGGLGTGVLIREDSPNCVAYRFTHLTVQEFLAATYYHICS
KRAIFDLFTESAMSWPKIGFQNHFRSALQRSQQAEDGHLDVFVRFLAGLLCPAAVRPLAG
LLAQGKDDGGQRVWAAGLLQDLLGSGGAVVSLRSVNVAYCLQELQHTEVLRSVEEDLRCG
GLGGKLTRTHCTALAYLLQVSPECSEEINLSACLDYSTVKSLLPQLLYCSHLRLENNHFK
DDVMELLGSLLSAKDCHLQKISLAENAISNKGAKALSRALLVNRTLITLDLRSNNIGSKG
AKFLAEALKMNQVLVSINFQNNLIEEEGARALAEVLLSNRKLVSLNVQKNCIGADGAKRI
AEALKTNRTLTELILSSNQLGDKGTAALAQALTVNHSLHSLHLQSNSISNKGMTALTKAL
RLNRGLICLNLRENSIGVEGAKDMARALQENSSLRHLDLTANLLHDEGVKAIAGAVKVNR
ALTTLRLQWNFIKCTATKSLAHALLTNSTMQLLDLQENAIGDEGVVALAGALKTNASLCT
LCLQGVSAGRSGAISMAEALMVNKTLHTLDLRGNSIGMEGAKALANALKTNRTLKSLNLQ
ENSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRTNSPDCVVEI
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaacacccattacaattctattctggacagaaacaagcgtatcgcatggcaa
gaggactgctatgttgacctccagtctacccccacctcaacttccaccaagggagagatg
gaagatgtgggctggatccagaaacatcaggggcatctgcagcgcttcattaccactccc
ctcctggagggggcgctgtcccacatgaggaagctggagctgctgagccagggtgaggag
gcccaggtacaggctggggggcagctgcaggagcgggtgggcaccctcacctccatcctg
gccagcatggacccccagggctccaacgctctccaggccttccttgagaactctgactcc
cagatgtaccggcttatcacgatgcatgaccccatggttcaggagcacaaggaggctctt
ctgttgcagtatcccacaccaagtgacagcctctcccctggcccctgtagcccagaattc
tcctcctccagaatcttgctcctggtcgacggcctctcggacctccagcagaaggagcac
gacctcatgcaggtggaggccacccgtggggcgcggagacaccacgtcagacagctggcc
ctggccaaactcctggagcccctcacacgggtcagcctgccccccagggtctccctcacc
gtgggagtggccggcatcggcaagagcacccttgtgggacattttgtacgcctttggagc
agaggcgagatctgcacggacgtgagttttgtcttgccctttgccttctgggagctgaac
actggggagaagctgtcggccgaaagactggtgaagctggccttccctcacatgacggac
cccagcctggtgctgagtggtacatgtcggacattgctgattttcgacggtctggacgag
ttccgttgtcctctggacttctcggagactgtgccttgcacagaccccaagaaggaggtg
tcggtggacgacttggtcaccaacatcatccggggcaacctgctccctgaagcagcggtg
tgggtgacctccaggccggcggtggcctcgttgattcctgggggactagtggacaggttg
accgagatccccggattcagcccgaaggaaatccggctgttcctgagccacaacttccct
aagggagatactgccagtcagatatggactcacttggagtcaaacaagatcttcatggtg
atgtcttacatgccttgcatttgctggatagtggcggttacctttgggtacctgttggag
agtggctggcaggagggtcttcccaggacctgcactgagctctactcccacttctgcgct
atgagagccgaagcaggtgagcccagaggcagagagcctatcaagatggatcagcttaac
gggaacaaccgcaagctgctgggaagtctgggccgactggccttctacggacttctgaag
cacaaatacaccttcagtgagcaggacatgagggcctatggagtagaccttccatccacc
cagggtggcctaggaactggagtactgatccgtgaggattccccaaattgtgtggcctac
cgcttcacccacctgactgtgcaggagttcttagcagccacatactaccacatctgctcc
aaacgtgccatctttgacctgttcaccgagagcgccatgtcctggcccaagatcggcttc
cagaaccacttcaggagcgccctgcagcggtcccagcaggcagaggatggtcacctggac
gtgtttgtgcggttcctggcggggttgctgtgcccagcggcagtgcggccgctggcaggc
ctgctggcccaggggaaggacgatgggggccaaagggtttgggcggctgggctgctgcag
gacctcctgggcagcggtggtgctgtggtgtcactacgctcagtgaacgtggcctactgc
ctgcaggaactgcagcacacagaggtgctacgcagcgtggaggaggacctgcgctgtggt
ggcctgggagggaagctgacacggacacactgcacagcgctggcctacctgctacaggtg
tctccagagtgcagcgaggagatcaacctgtcggcatgtctggactactccactgtaaaa
agcttgctgcctcagctgctctactgcagccatctcagattggaaaataaccattttaaa
gatgatgtcatggaactgctgggaagcttactgagtgcaaaggactgccaccttcagaag
ataagtctggcagagaacgctatcagcaacaaaggggccaaggccctgagtcgagcacta
ctggttaaccggacgctaattacgcttgatctccgtagcaacaacattggatctaaaggc
gccaagtttctagcagaagccctcaaaatgaatcaggtcctggtgtccatcaatttccaa
aataatctcattgaggaggagggcgctcgcgccctggctgaggtgctgctgtccaaccgc
aaacttgtctcgctgaatgtacagaagaattgtattggagcagatggagccaagaggatt
gcagaagcgctaaagacaaaccggacacttacagaactgattctgagcagtaaccagctg
ggggacaaaggcactgcggccctggcccaggccctgaccgtcaaccacagcctccactcg
ctgcacctgcagagtaactccatcagtaacaaagggatgactgcgttaaccaaggctctg
cggttgaaccgtggactcatctgtctgaacctgcgtgagaactcgatcggggtggagggg
gcgaaggatatggccagggcactgcaggagaacagctctctccgacacctggatcttaca
gccaaccttctgcacgatgagggggtgaaagccatagctggagctgtgaaggtcaaccga
gcacttactactttacgtctccagtggaatttcatcaagtgcacagccactaaatccttg
gcccatgctctactcaccaactccaccatgcagctactagatctacaggaaaatgccatt
ggggatgaaggagtggtagctctggcaggagccctgaagaccaatgcgtctctctgtaca
ttgtgtctccagggcgtatcagcaggcaggagtggtgccatctcaatggccgaggctcta
atggtcaacaaaaccctgcacactctggacctacgagggaactccatagggatggaggga
gccaaggctttggctaatgcactgaagacaaacagaacactcaaatcattaaatctgcag
gagaactctctgggaatggatggagccatattcatcgccacagccctgaaaggaaaccac
cagctaacttatataaacttgcaggggaacggcattggagagtcgggagcaaaggtaatc
tctgatgccatcagaaccaactctccagactgtgtggtggagatctga
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