KEGG   Salmo trutta (river trout): 115159781
Entry
115159781         CDS       T08542                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
stru  Salmo trutta (river trout)
Pathway
stru04120  Ubiquitin mediated proteolysis
stru04137  Mitophagy - animal
stru04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115159781
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115159781
   04137 Mitophagy - animal
    115159781
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    115159781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stru04121]
    115159781
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115159781
Ubiquitin system [BR:stru04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   115159781
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   115159781
  Exosomal proteins of other body fluids (saliva and urine)
   115159781
  Exosomal proteins of colorectal cancer cells
   115159781
  Exosomal proteins of bladder cancer cells
   115159781
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 Dsc3_N OTU1_UBXL
Other DBs
NCBI-GeneID: 115159781
NCBI-ProteinID: XP_029565689
LinkDB
Position
23:30592356..30593243
AA seq 229 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGN
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctaactggtaagaccatcacccttgaggttgagcccagt
gacaccatcgagaacgtcaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatctttgccggcaagcagctggaagatggccgcaccctgtccgactacaac
atccagaaggagtccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttc
gttaaaaccctgactggtaagaccatcacccttgaggttgagcccagtgacaccatcgag
aacgtcaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
tttgccggcaagcagctggaagatggccgcaccctgtccgactacaacatccagaaggag
tccaccctccatcttgtgctccgtctgaggggaggtatgcagatcttcgttaaaaccctg
actggtaagaccatcacccttgaggttgagcccagtgacaccatcgagaacgtcaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatctttgccggcaag
cagctggaagatggccgcaccctgtccgactacaacatccagaaggagtccacccttcac
ctggtcctgcgtcttcgtggaggcaactag

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