Salmo trutta (river trout): 115159859 Help Entry 115159859         CDS       T08542                                  Name (RefSeq) transportin-1-like isoform X1   KO K18752   transportin-1 Organism stru  Salmo trutta (river trout) Pathway stru03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:stru00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     115159859  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:stru03019]     115159859    03009 Ribosome biogenesis [BR:stru03009]     115159859 Messenger RNA biogenesis [BR:stru03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      115159859 Ribosome biogenesis [BR:stru03009]  Eukaryotic type   Pre-40S particles    Export and cytoplasmic maturation factors     115159859   Pre-60S particles     115159859 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HEAT_EZ HEAT HEAT_GCN1 TPR_IMB1 HEAT_2 Vac14_Fab1_bd Cnd1 TPR_IPO5 TOR1L1_N Arm IBN_N HEAT_EF3_N HEAT_MROH2B_C PDS5 TPR_DNAAF5 Adaptin_N HEAT_GCN1_C CEP104-like_TOG TTI1 MMS19_C UNC45-central Ltn1_1st HEAT_GCN1_C_2 TPR_TTI1_C INTS7_N Dopey_N RTP1_C1 SCD HEAT_DAAF5 VPS15-like_hel RRN3 ARM_TBCD RXT2_N Motif Other DBs NCBI-GeneID:  115159859 NCBI-ProteinID:  XP_029565791 Ensembl:  ENSSTUG00000036279 LinkDB All DBs Position 23:complement(34095639..34142736) Genome browser AA seq 897 aa AA seqDB search MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE DEATRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDSSPLIRATAGILITTIASK GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNVMIPKFL QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDDFIENLFALATDEEPEVRKNVCRALV MLLEVRMDRLLPHMHNIIEYMLQRTQDQDENVALEACEFWLTLAEQPVCKDVLCNHLSKL IPVLVNGMKYSEIDIILLKGDVDEDDDEAIPDNEQDIRPRFHRSRTVAQQHEGDRDGIED DDDDDDDDDDLDDDDTISDWNLRKCSAAALDVLANVFRDDLLLPILPLLKELLFHPEWVI KESGILVLGAIAEGCMQGMIPYLPELIPHLVQCLSDEKALVRSITCWTLSRYAHWVVSQP PDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFNKY QHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIAKWNQLKDEDKDLFPLLECLSSV ATSLQSGFLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEAPDKDFMIVALDLLSGLAE GLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPIL GTNLNPELISVCNNATWAIGEISIQMGAEMQPYVTMVLHQLVEIINRPNTPKTLLENTAI TIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFI FFCDAVASWVNPKDDLRDMFGKILHGFKNQVGEDNWRRFSDQFPLPLKERLAAFYGV NT seq 2694 nt NT seq  +upstreamnt  +downstreamnt atggagtgcgagtggaaaccagatgagcaaggacttcagcaaattctacagcttttgaaa gagtcccagtctcccgatacgtccactcaaagatccgtccagcaaagattggaacagctc aaccaatacccagacttcaacaactacttgatattcgtgctgacgaagttgaaatcagaa gatgaggcgacccgctctcttagtggtctgatcctaaagaacaatgtgaaggcccactac cagaacttccccaatggagtgtctgacttcattaagagcgagtgtctacagaacattgga gactcctcgcccctcatccgggccactgcgggcatcctcatcaccaccatcgcctccaaa ggggagctgcagaactggcccgagctgctgcccaaactctgcctcctgctggactctgag gactacaacacctgtgagggggcgtttggcgctcttcagaagatctgtgaggactcagca gagatcttggacagtgacgtgttggaccgtccgcttaacgttatgatcccaaagttcctg cagttcttcaaacacagcagccccaagataaggtctcatgccatcgcctgcgtcaaccag ttcatcatcagtaggacccaggccctaatgctgcacatcgacgacttcatcgagaacctg tttgccctggcgactgatgaggagccagaggtgaggaagaacgtttgcagagctctggtc atgctgctggaagtccgcatggaccgtctcctaccgcacatgcacaacatcatagagtac atgctgcagaggactcaggaccaggatgagaatgtggctctggaggcctgtgagttctgg ctgacactggctgaacagcctgtctgtaaggatgtgctgtgtaaccacctctccaagctg attcctgtcctcgtcaacgggatgaagtactccgagatcgacatcattctgctcaagggt gatgtggacgaggatgatgatgaggccatccctgacaacgagcaggacattaggcccaga ttccaccgctcccgtaccgttgcccagcaacacgagggcgaccgtgacggcatcgaggat gacgacgacgatgatgatgatgatgatgacctggacgatgatgacaccatctctgactgg aacctccgtaagtgttcagcagcagcgttggatgtgttggcaaacgtgttcagagatgac ctgctcctccccatcctgcctctcctcaaagagctgctcttccacccagagtgggtcatc aaggagtctggtatactggtcctgggggccatcgccgagggttgtatgcagggtatgatc ccctacctgccagagctcatcccccacctggtgcagtgtctgagtgatgagaaggccctg gtgcgctccatcacctgctggaccctgagtcgatatgcccactgggtggtcagccagcct cctgacacctatctgaagccactgatgaccgagctcctcaaacgcatcctggactccaac aagagggtgcaggaggccgcctgcagtgcctttgccactctggaagaagaggcgtgtaca gagttggttccctacctggcctacatcctggacactctggtgtttgccttcaacaagtac caacacaagaacctgctaatactgtacgatgctatagggacgctcgctgactctgtggga caccacctcaacaagccggagtacattcagatgctgatgcctccactgatagcaaagtgg aaccagctgaaggacgaagacaaggatctgttccctttactagagtgcctgtcgtcagta gccacgtctctccagagtggtttcctgccctactgtgagcctgtgtaccagcgctgtgtc aacctggtgcagaagaccctcgctcaggccatgctccaccagtcccagccagaccagtac gaggctcctgataaggactttatgattgtggctctggacctgctcagtggactggccgag gggttgggcggcaacatcgagcagctggttgcccgtagcaatatcctcacgctcatgtac cagtgcatgcaggacaaaatgccagaggtgcgtcagagctcctttgctctgctgggtgac ctgactaaagcttgtttccagcatgtaaagccatgcatcgctgatttcatgcctatacta ggcactaatctgaacccagagttgatatcagtgtgcaacaatgcaacgtgggcaatcgga gagatatctatacaaatgggggctgagatgcagccctacgtgaccatggtgctgcaccag ctggttgagatcatcaacaggcccaacaccccaaagaccctgctggagaacacagcaata acaattggtcgtcttggttacgtttgtcctcaagaggtggcacccatgctacagcagttt ataagaccctggtgcacctctctaaggaacataagagacaatgaggaaaaagactcagcg ttccgaggtatctgcactatgatcagtgtcaaccctggaggagtggtacaggactttata tttttctgtgatgcagtggcctcgtgggtaaatccaaaggatgatctgcgagacatgttt ggcaagatcctccatgggttcaagaaccaggtgggcgaggataactggaggcgtttctca gaccagtttccactgcctctgaaggaacggctggcggccttctacggggtgtaa

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