Salmo trutta (river trout): 115159870
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Entry
115159870 CDS
T08542
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115159870
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115159870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115159870
03009 Ribosome biogenesis [BR:
stru03009
]
115159870
04131 Membrane trafficking [BR:
stru04131
]
115159870
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115159870
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
115159870
Ribosome biogenesis [BR:
stru03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115159870
Membrane trafficking [BR:
stru04131
]
SNARE
SNARE associated proteins
Others
115159870
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115159870
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115159870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_33
AAA_5
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
nSTAND3
AAA_28
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
115159870
NCBI-ProteinID:
XP_029565805
Ensembl:
ENSSTUG00000039209
UniProt:
A0A674D606
LinkDB
All DBs
Position
23:complement(34613180..34633444)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQAKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDAALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNAGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILGAN
LRKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPSAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTNSAPG
AGPSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaatcgaaaaatgatgatctatccacagcgattttaaagcaaaag
accaggccgaaccggttggttgtggatgaatctctcaatgaggacaacagtgtggtctcg
ctgtctcaggccaagatggacgagttgcagttgttcaggggagacacagtgctgatgaaa
ggaaagaagagacgggagacggtctgcatcgtgctctctgatgacacctgctccgacgag
aaggtccgcatgaacagagtggtccgcaacaacctaagagtccgcctgggagatgttatc
agtattcagccatgcccagacgtgaagtacgggaagcggatccacgttctgcctattgat
gacactgtggaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctg
gaggcctataggcccatcaggaaaggggacatcttcctggtgaggggaggcatgcgagct
gtggagttcaaggtagtggagacggaccccaacccctactgcatcgtggccccagacaca
gtcatccactgtgagggggagcccatcaaacgagaggatgaagaggagtctctgaatgag
gttggctatgatgacattggtggtgtgaggaagcagctggcccagattaaggagatggtg
gagctgcccctgagacacccagcactgttcaaggccatcggtgtcaagcctccaagggga
atcctgctgtacggaccccctggaacaggaaagactctgatcgcccgtgctgtggcgaat
gagactggagccttctttttccttatcaatgggcctgagatcatgagtaaactggccgga
gagtctgagagtaacctgaggaaggccttcgaggaggctgagaagaatgctcctgccatc
atcttcattgatgaactggacgccattgcaccaaaaagagaaaagacacacggtgaggtg
gagaggcgcattgtgtcccagctcctcacgctcatggacggccttaagcagcgtgctcac
gtcattgtcatggcagccaccaacagacccaacagcattgacgccgccctcaggcgattt
gggcgttttgacagggaggtggacattggcattcctgacgcaacaggcagactggagatc
ctccagatccataccaagaacatgaaactgtccgacgacgtcgacctcgagcaggttgcc
aatcagactcacggccacgtgggtgctgacctggctgctctgtgctctgaagccgccctg
caggccatcaggaagaagatggatctcatcgaccttgaggacgagaccatcgacgcagag
gtcatgaactcccttgccgtcaccatggacgacttcagatgggctctgagccagagcaac
ccatctgccctgagagagactgtggtggaggtgcccaacatcagctgggaggacatcggt
ggtctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcaccca
gacaagttcttgaagtttggcatgaccccgtccaagggcgtgctgttctacggaccccca
ggttgcggtaagaccctgctggccaaggccatcgccaacgagtgccaggccaacttcatc
tccatcaaagggcccgagttgctcaccatgtggtttggtgagtccgaggccaatgtccga
gagatcttcgacaaggctcgccaggccgccccctgcgtgctcttctttgacgagctggac
tccatcgccaaggcgcgtggcggcaacgcgggtgatggtggcggagcagccgaccgcgtc
atcaaccagatcctgacggagatggacggcatgtccagcaagaagaacgtcttcatcatc
ggcgccaccaacaggcctgatatcatcgacccggccatcctgaggcccggcagactggac
cagctcatctacatccccctgccagatgagaagtcccgcatcaacatcctcggagccaac
ctcaggaagtcacccatcgccaaggatgtggacctggatttcttggccaagatgaccaat
ggtttctctggagctgacctgacagagatctgccagagggcttgtaagatggccatcagg
gagtccatcgagaacgagatcaggagggagagggagaggcagaccaacccctcagccatg
gaggtggaggaggacgaccctgtcccagagatccgtaaggaccactttgaggaggccatg
cgtttcgcccgccgctccgtcagcgacaacgacatccgcaaatacgagatgttcgcccag
acgttacagcagagtagaggcttcggcagtttccggttccccactaactctgcgccaggg
gccgggcccagccagggctctgctggtggcagcggtggtacagtcttcaacgaggacaac
gatgatgacctctatggttaa
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