Salmo trutta (river trout): 115159966
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Entry
115159966 CDS
T08542
Name
(RefSeq) lymphotoxin-alpha
KO
K05478
tumor necrosis factor ligand superfamily member 15
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115159966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115159966
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Tumor necrosis fators
115159966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNF
DUF8789
Motif
Other DBs
NCBI-GeneID:
115159966
NCBI-ProteinID:
XP_029565981
LinkDB
All DBs
Position
23:37173525..37175873
Genome browser
AA seq
240 aa
AA seq
DB search
MDKCARNSEIPHDTVISMAQQESVVLLLKHCQEMKRQESRLRLVTLFLVLGCAAVFVFTQ
RVNRDCNEKHSLKPAEYSRQQAIDRQGQNLKPNAHLTTSSRCNSVPEDYIQWEHEAIGLV
HMQNFTYDEKKHALVVPQGGRYFVYVGVNFRMPDKDKVSGEIHFLSLKVLKFSNSYQYNC
PIMEVKDSIPGNRRGTRTVYTGQVVALEEGDLLRVSINEDNYELIDCSTETTMYIGAFLL
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggataagtgcgcaaggaacagcgagattcctcacgataccgtgatttcaatggcgcag
caagagtctgttgttcttttgctcaaacactgtcaagaaatgaagcgacaggagagtcgc
ttgcgtcttgtcacgttattcttggttctgggttgtgcagctgtatttgtctttacccag
cgtgtgaatagagactgtaatgagaagcattcactcaaacctgcagaatactcacgacag
caagctatagatcggcaaggacagaacctgaagccaaacgctcacctgacaacatcatca
aggtgcaactcagtgcctgaagattacatccaatgggaacacgaggccattggcttggtg
cacatgcaaaatttcacctatgatgagaaaaagcatgctctggttgtccctcagggaggc
cgatactttgtctacgtaggggtcaactttcgaatgccggataaagacaaggtatctggc
gagatccatttccttagcctgaaagtcctgaaattctccaatagctaccaatataattgt
cctatcatggaagtcaaggatagcataccaggcaataggagaggaacgaggactgtgtac
acgggacaggtggttgctctggaggaaggggacctcctgagggtgtccattaatgaagac
aattatgaactgattgactgttcaacagagactaccatgtatattggtgcttttctcctc
tag
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