Salmo trutta (river trout): 115159978
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Entry
115159978 CDS
T08542
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
stru
Salmo trutta (river trout)
Pathway
stru04210
Apoptosis
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115159978 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115159978 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115159978 (sptan1)
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115159978 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
115159978 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
115159978
NCBI-ProteinID:
XP_029566023
Ensembl:
ENSSTUG00000007588
LinkDB
All DBs
Position
23:complement(37530482..37586989)
Genome browser
AA seq
2508 aa
AA seq
DB search
MATTSPQRMDTSGVKVLESADDIQERRQQVLDRYRRFKELSGVRRQKLEDSYRFQFFRRD
ADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISE
GHFASETIRTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAMA
TSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGKLSQESHPEVELIVRKQEE
VNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQA
LLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHLKRDELITNWEQIRTLAAE
RHARLNDSYRLQRYTSDFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDA
HEDSFKATDEAGQALLNTGHYASEEVKEKLGVLTEEKESLLELWEVRRQQYEQCMDLQLF
YRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATK
LIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFSRDSDELKSWINEK
MKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYAADEVSVR
MDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTS
VQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIKRKQEALVARYDALRDP
MAARKQKLSDSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAE
IAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLEELNGRWDTLKGKAGQRRQDLEDSLQA
QQYFADANEAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQ
AQTCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDR
QGFVPAAYVKKLDPTQSSSRENLLDEQGSIGLRQDQIENQPLAKEACSVSVRMKQVEELY
GTLQELGEKRKDMLEKSCKKFMLFREANELQQWINEKEGALTNEEVGSDLEQVEVLQKKF
DDFQKDLKANESRLRDINKVASELESEGLMAEEATMVQAQEQVMLGSAPGQDEGDNKNAS
PWKNVRLAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIE
EKNQALNTDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDI
QEKCTELNTAWSSLVGRADQRKDKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSEELAKD
VTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERADL
EKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDF
DKAINVQEEKIAALQSFADQLVGADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGES
QTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADR
IRGVIDTGNALIHRGACSGSEDAVKSRLGALDEQWQFLVNKSAEKSQKLKEANKQQNFNT
GIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLT
ASTAFDPTQVKDKRDAVNGRFAKIKSMATGRRAKLNESHRLHQFFRDLDDEESWIKEKKL
LVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTGKKLSDDNTIGQDEIEQRL
AQFEEHWTELKDLAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAV
QGLLKKHEAFETDFSVHRDRVNDVCSNGDELIKKNNHHVDSISAKMASLRGKVSELERAA
AMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGL
QAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMKRWNQLLDNSQARKKKLLEAQEH
FRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHEAFRSSLSSAQA
DFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDK
LRQEFAQHANAFHQWLQETRTYLLDGIAYRRVVRVIQYEVGDDLSGRSCMVEESGTLESQ
LEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRM
QHNLEQQIQARNTTGVTEDALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEE
GEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYV
TKEELYQNLSKEQADYCISHMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctcctcagagaatggataccagtggggtgaaagtgctggagtctgct
gatgacatccaggagcgccggcagcaggtgttggatcgctaccggcgtttcaaggagctg
tcgggcgtgcgacggcagaagctggaggactcgtaccgcttccagttcttccgccgcgat
gctgacgagctggagaagtggatccaggagaagctgcagatcgcctctgatgagaactac
aaggaccctaccaacctccagggcaagctccagaaacatcaggccttcgaggcggaggtg
caggccaacgctggagccatcattaagctagacgagactggcaaccttatgatctctgaa
ggccactttgcctccgaaaccatccgcactcgtctggaggagcttcaccgtctttgggac
ctgctgctgcagaagaccaaggagaagggtgtccgtctgctgcaggcccagaagctggtg
cagtacctgcgcgagtgtgaggatgccctggactggatcagtgacaaggaggccatggcc
acctcggaggagctgggccaggacctggagcacgtagaggtgctccagaagaagtttgag
gagttccagacggacctggcagcccacgaggagcgtgtgaatgaggtgaaccagctggcg
ggcaagttgagccaggagtcccaccccgaggtggagctcattgttcgcaagcaggaggag
gtgaacgccgcctggcagaggctcaagggcctggcgcagcagaggcagggcaggctgttc
ggagccgccgaggtgcagagatttaacagggatgtggacgagaccattagctggatcaag
gagaaggagcagctcatggcatccgatgactttggccgggacctggccagcgttcaggct
ctgctgcgcaagcatgagggcctggagagagacctggctgccctcgaggacaaggtcaac
actctgggcggagaggcagaacgtctgcagcagacccacccccagaacgcctcccagatc
cacctgaagagggatgagctcatcaccaactgggagcagatccgcacgctggccgccgag
cgccacgcccgcctcaacgactcctacaggctgcagcgctacacttcagacttccgtgac
ctgaccagctgggtgacggagatgaaggccctgatcaacgctgatgagctggccaacgac
gtggctggagctgaggctctcctcgaccgccaccaggaacacaagggtgagattgacgcc
catgaggacagcttcaaagccacggacgaggccggccaggctctgctcaacactggacac
tacgcctcagaggaggtcaaggagaagctgggtgtactgactgaggagaaggagtctctg
ctggagctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcagctcttc
tacagggacacggagcaggtcgacaactggatgagcaagcaagaggcgttccttctgaac
gaggatcttggtgactctctggacagcgtggaggccctgctgaagaaacacgaggacttt
gagaagtccctcagcgctcaggaggagaagatcactgccctggatgaatttgccaccaaa
ctgatccagaacaaccactacgccaaggaggatgtggccactcgtagagatgctctgctg
agccgccgtaacgccctgcatgagcgtgcccagtcccgccgtgccgccctggaggactcc
ttccacttgcagcagttctcccgcgactcggacgagctcaagagctggatcaatgagaag
atgaagactgccaccgacgaagcctacaaggatccgtccaacttgcagggcaaggtccag
aagcaccaggccttcgaggcggagctgtcagccaaccagagccgcatcgacgcgctgcag
aagtctggacaggagctcctggacggcaagcactacgccgccgacgaagtgtcggtccgc
atggacgaggtcagctcccagtggaagaagctgctggaggccaccgagctcaaaggcatc
aagttgcgtgaggctaaccagcagcagcagttcaacaggaatgtggaggacattgagctg
tggctgtacgaggtggagggccacctggcctccgacgactacggcaaggacctgaccagc
gtccagaacctgcagaagaaacatgccctgctggaggccgatgtggccgcacaccaggac
cgtattgacggcatcaccatccaggcgcgtcagttccaggaggcgggccactttgacgct
gacaacatcaagcgcaagcaggaggcgctggtggcgcgctacgacgcccttcgcgacccc
atggctgcccgtaagcagaagctatcggactcgctgcggctgcagcagctcttcagggat
gtggaggacgaggagacctggatccgggagaaggagcccatcgccgcctccaccaaccgg
ggcaaagacttgattggcgttcagaacttgctgaagaagcaccaggccctgcaagcggag
atcgccggccacgaaccccgcatcaaggctgtcacccagaagggagaggccatggtggag
gaaggtcactttgccggagaggaggtgaaggtgaagctggaggagctgaacggccgctgg
gacaccctgaagggcaaggccgggcagcgcaggcaggacctggaggattcgctgcaggcc
cagcagtactttgccgacgccaacgaggcagagtcctggatgagggagaaggagcccatt
gtgggcagccccgactacggcaaggacgaggactctgctgaggccctgctaaagaaacac
gaagccctgatgtctgacctgagtgcctatggaagcagcatccaggctctgaaggagcag
gcccaaacctgtaggcaacaagtggctcccaccgatgatgagacgggtaaagagctggtg
ctggccctctatgactaccaggagaagagcccccgcgaggtcaccatgaagaagggagac
atcctcaccctgctcaacagcactaacaaggactggtggaaggtggaggtgaacgaccgc
cagggttttgttccggcagcctacgtcaagaagctggatcccacccagtcctcttccaga
gagaacctgctggatgagcagggcagcatcggcctgcgccaggatcagatcgagaaccag
ccgttggccaaggaggcgtgcagtgtgtctgtacgcatgaagcaggtggaggaactgtac
ggaactctccaggagctgggcgagaagcgcaaggacatgctggagaagagctgcaagaag
ttcatgctgttccgcgaggccaacgaactgcagcagtggattaacgagaaggagggagcc
ctcaccaatgaggaggtgggctccgacctggagcaggtggaggtgctgcagaagaagttt
gacgacttccagaaggacctgaaggccaatgagtctcgtctgagggacatcaataaggtg
gcgtctgagctggagtctgagggcctgatggccgaggaggcaaccatggtgcaagctcag
gaacaagtgatgctgggatctgctcctggccaggatgagggtgataacaagaatgcctct
ccatggaagaatgtacgcttggctgttcaaacgacggctaactttaatactatcaaggag
ctgaacaaccgctggagatccctgcagcagctggccgaggagaggagcaacatgctgggt
agtgcccacgaagtgcagaggttccacagggatgcagatgagaccaaggagtggatcgag
gagaagaaccaggcgctgaacacagacaactatggccacgacctggccagcgttcaggcc
cttcagcgcaaacacgagggctttgagagagacctggccgccctgggagataaggtgaac
tccctgggggagacagcggagcgtctgatccagtcccacccggaggcggtggacgacatc
caggagaagtgcacagagctcaatacggcctggagcagcctggtggggcgcgctgaccag
cgaaaggataagctaggcaactcccacgacctgcagcgcttcctctccgacttcagggac
ctcatgtcctggatcaacggcatccgaggcctggtgtcctcagaagagctggccaaggac
gtgaccggggctgaggccctgctagagagacaccaggagcaccgtactgagatcgacgcc
cgtgcgggcaccttccaggcctttgagcagtttggccagcagctgttggcgcgcggccac
tacgccagccctgagatccagcagaagctggaggccttggaccacgagagggcagacctg
gagaaggcctgggtgcagagacgaatgatgctcgaccagtgcctagagctccagctgttc
aaccgtgactgtgaacaggctgagaactggatggcggctcgcgaggccttcctggccagc
gacgacaaaggtgactccctggacagcgtggaggctctcatcaagaaacatgaggacttt
gacaaggccatcaacgtgcaggaggagaagatcgctgctctgcagtcctttgcagaccag
ctggttggcgctgatcattatgccaaaccagagatattcaaccgtcgcaatgaagtcctg
gacaggtggcgccgtctgaaggctcagatgattgagaagcgctccaagctgggcgagtcc
cagacgctgcagcagttcagccgcgacgtggacgagatagaggcctggatcagcgagaag
ctgcagacagctacagacgagtcctataaggaccccaccaacatccagctgtcgaagctg
ctgagtaagcaccagaagcaccaggccttcgaggcggagttgcatgccaacgcagaccgc
atccgtggggttatcgacactggcaacgccctcatccatagaggggcctgctccggcagt
gaggatgcggttaagtcgcgtctgggtgccctggacgagcagtggcagttcctggtgaac
aagtcggcagagaagagccagaagctgaaagaagccaacaagcagcagaacttcaacact
ggcatcaaggactttgacttctggctctctgaggtcgaggcccttcttgcctctgaggat
tatggcaaagacctggcctcagtcaacaacctgctgaagaaacaccagcttctggaagcc
gacatctctgctcatgaggatcgtctgaaggacctgaacggccaggctgacagcctgacg
gccagcacggccttcgaccccacccaggttaaggacaagcgcgacgccgtcaatggacgc
ttcgccaagatcaagagcatggccactggccgccgtgcaaaactcaacgagtcgcaccgc
ctgcaccagttcttcagggacctggacgacgaggagtcttggatcaaagaaaagaaattg
ctagtgagttcggaggactatggacgtgatttgacaggagtgcagaatctgaggaagaaa
cacaagaggctggaagctgagttgggggcccatgagccggccatccagtctgtgcaggac
acagggaagaagctgtccgatgacaacaccatcggccaggatgagattgagcagaggctg
gcccagtttgaggagcactggacggagctgaaggacctggctgcagccaggggacagagg
ctggaggagtcactggagtaccagcagtttgttgcgaatgttgaagaggaggaagcctgg
attaacgagaagctgaacctggtgggaagtgaagactacggggataccctggctgctgtg
cagggcctgttgaagaagcatgaggcgtttgagactgacttctccgtgcacagggacaga
gtgaatgacgtgtgttccaacggagacgagctcatcaagaagaacaaccaccacgtggac
agcatctcagccaagatggcgtccctgcggggcaaggtgtctgagctggagagggccgct
gccatgagaaaagccaagctggatgagaactctgccttcttgcagttcaactggaaggct
gacgtagtggagtcctggatcggtgagaaggagaacagcctgaagactgatgactacgga
cgagatctctcctctgtgcagacgttgctcactaagcaggagacatttgacgcagggctg
caggccttccagcaggagggtatcaccaacatcacggccctcaaggaccagctgctggcg
gccaagcacgtccagtccaaggccatcgaggcgcgccacgctgccctcatgaagcgctgg
aaccagcttctcgacaactcgcaggcccgcaagaagaaactgctggaggcccaggaacac
ttcaggaaggtggaagacctgttcctgacttttgccaagaaggcgtcggccttcaacagc
tggtttgagaacgctgaggaggacttgacagatccggtgcgctgcaactcgctggaggag
atccgggcgctacgcgacgcccacgaggccttccgctcatcgctgagctcggcgcaggcc
gacttcaaccagctggctgagctggaccggcagatcaagagctaccaggtggtgtccaac
ccttacacctggttcaccatggaggccctggaagagacctggaggaacttgcagaagatc
atcaaggaacgagagctggagctgcagaaggagcagaggaggcaggaggagaacgacaag
ctgcggcaggagtttgcgcagcacgccaatgcattccaccagtggctgcaggagaccagg
acatatcttctggatggcatagcttatcgacgggttgtccgtgtcattcaatatgaagtc
ggtgatgatctttccggaaggtcctgcatggtagaagagtccggaaccttggaatcacaa
cttgaggcaaccaagcgcaagcaccaggagatccgggcaatgcgtagccagctgaagaag
attgaggacctgggtgcggccatggaggaggctctgatcctggacaacaagtacacagaa
cacagcacggtgggcctggcccagcagtgggaccagctagaccaactgggcatgaggatg
cagcacaacctggagcagcagatccaggccaggaacaccactggagtgacagaggatgcc
ctgaaggagttcagcatgatgttcaagcactttgacaaagagaagtctggccgtctgaac
caccaggagttcaagtcgtgtctgcgctcactgggttacgacctgcccatggtggaggag
ggagagccagaccccgagtttgagtccatcctcgacactgtcgaccccaacagggatggc
aatgtgtccttgcaggagtacatggccttcatgatcagccgcgagacagagaacgtcaag
tccagcgaggagattgagagcgccttccgagccctcagcgtcgatgccaagccctacgtt
accaaggaggagctctaccagaatctgtccaaggaacaggcagactactgcatctcgcac
atgaagccctacttagacagcaagggccgggaaatgccctcggccttcgactttgtcgaa
ttcacccgctcgctttttgtcaactga
DBGET
integrated database retrieval system
