Salmo trutta (river trout): 115159988
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Entry
115159988 CDS
T08542
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
stru
Salmo trutta (river trout)
Pathway
stru03082
ATP-dependent chromatin remodeling
stru03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115159988
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115159988
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
stru01009
]
115159988
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115159988
03036 Chromosome and associated proteins [BR:
stru03036
]
115159988
Protein phosphatases and associated proteins [BR:
stru01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115159988
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115159988
SWI/SNF complex
115159988
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115159988
PBAF complex
115159988
SWI/SNF complex
115159988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
115159988
NCBI-ProteinID:
XP_029566047
Ensembl:
ENSSTUG00000009408
UniProt:
A0A673XAV6
LinkDB
All DBs
Position
23:complement(37691375..37707258)
Genome browser
AA seq
370 aa
AA seq
DB search
MALSKTFGQKPIKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLSRRLASVEERKKI
VASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKGKRNSQWVPTLPNSS
HHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLDMEIDGQK
LRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILDEQTD
QRVIIKLNIHVGNISLVDQFEWDMSERENSPETFALKLCSELGLGGEFVTTIAYSIRGQL
SWHQRTYAFRSDFSENPLPTVEIAIRNTGDADTWCPLLETLTDAEMEKKIRDQDRNTRRM
RRLANTAPAW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagcaaaacctttgggcagaaaccgattaaatttcagttagagcaagatgga
gacttttacatggttggatcagaggttggaaactacctgcgtatgttcaggggctccctg
tataaaaggtacccatcactctcgaggaggttagcctcagtagaggagaggaagaagatc
gtagcatcatcgcacgccacaagtgtgactctgctgaaggcctccgaatgtgaagagatc
ttcgaggggaacgatgagaagtacaaagctgtttccatcagcacagaaccaccggcctac
ctcagggagcagaaggggaagaggaacagccagtgggtccccacgctgcccaacagctcc
caccacctggacgctgttccctgctccaccaccatcaaccgcaaccgcatgggccgcgac
aagaagaggaccttccccctgtgctttgacgaccacgacccggcggtgatccacgagaac
gcgtctcaggccgaggtgctggttcccatccgtctggacatggagattgatgggcagaag
ctcagagatgcgttcacctggaacatgaacgagaagctgatgaccccggagatgtttgca
gagatcctgtgtgacgacctggacctgaacccactggccttcgtcccggccattgcctca
gccatccgccagcagatagagtcctaccccacagacagcatcctggacgagcagaccgac
cagagggtgatcatcaagctgaatatccacgtggggaacatctccctggtggaccagttt
gagtgggacatgtcggagagggagaactctccggagacgtttgccctcaagctgtgctcc
gagctgggcctgggaggagagtttgtcaccaccatcgcctatagcatccgcggccagctt
agctggcaccagaggacgtacgccttcaggtctgatttcagtgagaatcccctgcctacg
gtggaaatcgccatccgcaacacaggtgacgctgacacatggtgccccctgctggagacc
ctgacagacgcagagatggagaagaagatcagggaccaggacaggaacaccagacgaatg
agacgacttgccaacactgcccctgcctggtag
DBGET
integrated database retrieval system
