KEGG   Salmo trutta (river trout): 115160023
Entry
115160023         CDS       T08542                                 
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
stru  Salmo trutta (river trout)
Pathway
stru03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:stru00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115160023 (cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:stru01001]
    115160023 (cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stru03021]
    115160023 (cdk9)
Enzymes [BR:stru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     115160023 (cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     115160023 (cdk9)
Protein kinases [BR:stru01001]
 Serine/threonine kinases: CMGC group
  CDK family
   115160023 (cdk9)
Transcription machinery [BR:stru03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115160023 (cdk9)
    Brd4/P-TEFb complex
     115160023 (cdk9)
    7SK RNP complex
     115160023 (cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Kinase-like RIO1 Pkinase_fungal
Other DBs
NCBI-GeneID: 115160023
NCBI-ProteinID: XP_029566107
Ensembl: ENSSTUG00000016931
LinkDB
Position
23:39069290..39073263
AA seq 393 aa
MQRDKTGNAAGAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKLAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKKYELYQKMELPKGQKRKVKDR
LKAYVKDPYALDLIDKLLVLDPAQRTDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEY
LAPPRRRGHMPQQPANQNRNPATTSQTEFDRVF
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgcagcgagacaaaacaggaaacgccgccggggctgaaaagcctgaccgggaggccgcc
attatgtccaaatactacgacggagtcgaattccctttctgtgatgagttttctaaatat
gaaaaacttgccaagatcggccaagggacctttggggaggtgttcaaagccaaacacaga
cagactgggaagaaggtagcactgaagaaagtgttgatggagaatgagaaagaagggttt
cccatcactgctttaagagagatcaagattctgcagctcttgaaacacgagaatgttgtc
aacctcatagagatctgtcgaactaaagccacccagttcaaccgctacaaaggaagcatc
tacttggtgtttgacttctgtgagcacgacctggcggggttgctaagcaacgccaatgtg
aaattcaccctggctgagatcaagaaggtgatgcagatgctgctgaacggactctactat
atccacagaaacaagatcttacacagagacatgaaggcggccaacgtgctcattacccga
gacggcgtgctgaagctggcagactttgggctggcgcgagccttcagcctggccaaaaac
agccagggcaaccgctacaccaaccgtgtggtcacactctggtacaggcccccagagttg
ctgctaggcgagagagactacgggcctcccattgacctgtggggtgcaggctgcatcatg
gcggagatgtggacacgcagtcccatcatgcaaggcaacacagagcagcaccagctcaca
ctcatcagtcagctgtgtggctctatcacagcagaggtatggccaggcgtggacaagaag
tacgagctttaccagaagatggagctccctaagggccagaagaggaaagtgaaggaccgc
ctcaaggcctacgtcaaggacccgtacgccctggacctgattgacaagctcctagtctta
gaccctgcacagaggacggacagcgacgacgctctgaaccacgactttttctggtcggac
cccatgccctcagacctgaagaacatgctctccacacacaacacgtccatgtttgagtac
ctggccccgccccgcaggagaggtcacatgccccagcagccggccaatcagaacaggaac
ccggccacgacgagtcagacggagtttgaccgggtgttttga

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