Salmo trutta (river trout): 115160031
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Entry
115160031 CDS
T08542
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-like isoform X1
KO
K08561
germ cell nuclear factor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115160031
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115160031
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
115160031
Nuclear receptors [BR:
stru03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
115160031
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115160031
NCBI-ProteinID:
XP_029566126
Ensembl:
ENSSTUG00000017537
LinkDB
All DBs
Position
23:complement(39529344..39702513)
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AA seq
485 aa
AA seq
DB search
MEIEKRTNGFEYTDRSKSINGFYADHGLHSEPSDGMDDQADPRLCLICGDRATGLHYGII
SCEGCKGFFKRSICNKRVYRCSRDKNCEMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGM
PGGRNKSIGPVEISNEEMERIMTGQEFKEDAGLPEHTWGNNGDSDHSSPDNGVSEGNQPS
PVSTLSSSRSLEMNGYTATYRDQYVGTPVSSHYQFLPHLFGYAQSVLRPTLARSLHSQSQ
TLVSQLVAAEDLAPLGTPMLIEDGYRVTQGELFALLCRLADELLFRQISWIKRLPFFCEL
SIEDYTLLLSATWQELILLSSLTIYSGQMFGDLANVTTKYSPSDYELQGFSEDGMDVMER
LIYLFRKFNQLKVSNEEYACMKAINFLTQDIRGLTNVSQLEKLNKRYWYVCQDLAEYKYP
HQPKRFPEIMMCLPEIRHIAGKLVNVPLEQLPLLFKAVLHSCKFSPNTLQAGTTTCLTTG
LIPGN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagattgagaagaggacaaatggatttgaatacactgatcggagcaagtcaattaat
ggcttctatgcagaccacggtctccattctgaaccgagcgatgggatggatgatcaggct
gacccgcgcttgtgcctcatctgtggcgaccgtgcgacgggcctgcactatggcatcatc
tcctgcgagggctgcaagggcttcttcaagcgcagcatctgcaacaagcgcgtctaccgc
tgcagccgtgacaaaaactgtgagatgtcgcgcaagcaacgcaaccgctgccagtactgc
cgcctgctcaagtgcctacagatgggcatgaaccgcaaagcaatcagagaggatggaatg
ccagggggaaggaataagagcattggacctgtcgagatttcgaatgaagaaatggagcgc
attatgacaggccaggagttcaaggaggatgctggtttgccagagcacacctggggaaac
aacggcgacagcgaccacagttcccccgacaatggtgtctccgagggcaaccaaccctcg
ccggtctccaccctgtcgtccagcaggtccctggaaatgaatggctacactgctacctac
cgggaccagtatgtgggcacgcccgtgtcctcacactaccagttcctgccgcaccttttt
ggttatgcccagtcagtccttaggcccaccctggcccgcagcctgcactcccaatcacag
accctcgtctcccaactggtggcagctgaggacctggcccccctggggacccccatgctc
atagaagatgggtacagggtgacccagggggagctgtttgccttgctctgtcggctggca
gacgagctactgtttcggcagatctcctggatcaagcggctgcccttcttctgcgagctg
tccatcgaggactacaccctgctgctcagtgctacttggcaggagctcatcctgctctcc
agcctcaccatctacagcggccagatgtttggggacctggccaacgtcaccaccaagtac
tcgccctctgactacgagctgcaagggtttagtgaagatggaatggatgtgatggagaga
ctgatatacctgttccgcaaatttaatcagctgaaggttagcaatgaggagtatgcctgt
atgaaagccatcaacttcctcacccaagatatccgagggcttaccaacgtttctcagctg
gagaagctgaacaagcgctactggtacgtgtgccaggacctagctgagtacaagtaccct
caccagcccaaacgcttccctgagatcatgatgtgcctccctgagatccgccacattgcc
gggaagctggtgaacgttccgttggaacagctccccctgctgtttaaggccgtcctacac
tcctgcaagttcagccccaacaccctccaagcaggcaccaccacctgcctgacaacaggc
ctcatccccggcaactga
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