Salmo trutta (river trout): 115160073
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Entry
115160073 CDS
T08542
Symbol
wrn
Name
(RefSeq) Werner syndrome ATP-dependent helicase isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stru03032
]
115160073 (wrn)
03400 DNA repair and recombination proteins [BR:
stru03400
]
115160073 (wrn)
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
115160073 (wrn)
DNA replication proteins [BR:
stru03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115160073 (wrn)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
115160073 (wrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DEAD
Helicase_C
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
MYO6_lever
Motif
Other DBs
NCBI-GeneID:
115160073
NCBI-ProteinID:
XP_029566196
Ensembl:
ENSSTUG00000006995
LinkDB
All DBs
Position
23:41434752..41477919
Genome browser
AA seq
1482 aa
AA seq
DB search
MKVDNNSQLTIVNSNMTDRNLPEWMSKIETTEKDALKQVQTGLYKRNVIEDDLPYLEFTG
TVIFSKEKNDCSFLSDELRSSLSPGSAVGFDIEWPPSFTKGQKKKVALVQLCASVEKCYL
FHLSSMSRFPTGLKIFLEDETIRKVGVGIEGDMWKLLSDFDVKLKNFVELGDLANGRLRC
GERWSLDGLVKHLFKKRLFKQQDVRCSNWDDFELSQEQKRYAATDAYAGLIIHNKLNSMD
PGVNTQSGLKDKLSQMANEMKELAGSIPEEVNDIQSVAMLVEDLYVSLTALRDLLSKNNT
SASTIDPELLSHDLPENKTLSPDGTDTTNGTQMDQGSPGEDEDLNHSNIDLFKVPEPMEE
ASKPIDYQGECIMSLDISEYELQMLERQAKKEDLEEQSTLEFQEKNALDDSAHLLYEVEL
ESEMLQCVEEVERLTQQKQPQPEEMPSGLGNEEDDIEELEEEEEFDPSLPEPLPEQIKCL
KMYFGHSRFKPVQWKVIHSVLKERRDNLVVMATGYGKSLCFQFPPVYCVGVSIVICPLIA
LMEDQVLQLEMSNIPACFLGSAQTKNVLAGLKQGQYRVVYMTPEYCSGNVSLLEQLDRSI
GISLIAVDEAHCISEWGHDFRGAYRSLGNLKRSLPNVPIVALTATASPSIREDIVKSLNL
ERPIVTCTSFDRPNLYLDVNRKSGGVFQDLNGFLKKSTGGDYEFEGSSIVYCPSRKEAER
VTSTLTSLGVTCGVYHAGLGIKQRRETQHRFMRDEIQCIVATVAFGMGINKADIRKVIHY
GAPKEMESYYQEIGRAGRDGLPSACHVLWAPADLKLNRFLINQVANNKYRGYKLKMMGKM
DLYLNSSKCRRKLILSHFEDKQLRKVTSGIMGTDQCCDNCRSGAVNRVGVNDTVDGGRQD
YGVLAFQLMGAVSAMGERFGSAAPILFLRGSYSQRVPEKYRCHPLFGAGKSVSEPCWKAL
SRELMNEEYLKDATGASKFCILCKITPKGRWWLSRALDEKQRTLLLQSSDPDLNTWSALR
QKQNPAATITNAPDRQYSTSQNNGLNVCSRPVNSKSIQKLDMSTGRTPTKLLTQVAMSKP
QPDPISARELELQTVLYAKLVAERQKLASEKDIPPAILATNKILLDMAKMRPCTVSSLKQ
VDGVSEAKSSMLTPLLKTITSFCELHNLKVDSSTLAAAPGPESVRGAVTGRSSSLPNSIA
ITYRLFQEEGKSMRQVSDVRSLPVAVLETQLIQAFRANYPLDTERAGLTTAIRTTISRII
QSHPVNSDLSDIKAIRARVPDDISTFLIQLTVELLQRQGMPTAPPAVSTSLQQPELTWIE
PEDKPVREPSFHKPVRTEKALAQPAPIKLSPAQPAPVEPPPPQPVGWSAVGLPDEMEMSM
EEDDLFRDLPMPEEVGPIPEYVLAPKALTAATKAVPRTSAVKLASWNQEPLDEDTQELFS
DSPPQNVSQPAKRKLPDWAELPRGSGSLTCTKKTKKNKGLFS
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagacaacaatagccagctaaccatcgtgaattcaaacatgactgacaggaat
ttacctgagtggatgtcgaagatagaaactactgaaaaagatgcacttaaacaggttcaa
acaggactctataaaagaaatgtcatagaggatgaccttccttatctagaattcactggc
acagtcatattcagcaaggagaaaaatgactgctcgttcctgtctgacgagttgaggtct
agtctttcacccggctctgctgtgggctttgacatagaatggcctccttccttcaccaaa
ggccagaagaagaaagttgccttggttcagctgtgtgcttctgtggagaagtgttacctt
tttcacctctcctccatgtcaagatttccaactggcttgaagatatttttggaggatgag
acaatccgaaaagttggcgtgggcatcgaaggagacatgtggaagctactctctgacttt
gatgtcaaactgaagaatttcgtggagcttggagatttggcaaatggaagactgcgatgc
ggtgagagatggagtctggatgggctcgtcaagcacctgttcaagaagaggctgttcaaa
cagcaggatgtgcgctgtagcaattgggatgactttgaactctcccaggaacagaaaaga
tatgcagccacagatgcttatgctggcctgatcattcataacaaactgaattctatggac
cctggagtgaatactcagtctggccttaaggacaagctgtctcaaatggccaatgaaatg
aaggaattagctggcagcatcccagaagaagtcaatgacatccagagcgttgcgatgcta
gtggaggacctgtatgttagtctcactgctctgagagatttgctgtcaaagaacaacacc
tcagcttctaccatagatccagaacttttgtctcacgacctcccagagaacaagaccctc
agtcctgacggaacagacacaaccaatggaacacagatggatcagggctcacccggagaa
gatgaggacctcaatcactctaacatagatctctttaaggttcctgaacccatggaagag
gccagcaaacccatagactatcaaggagagtgcatcatgtccctggatatctcagagtat
gagcttcaaatgctggagaggcaagctaagaaggaggatctggaggagcagtccactttg
gagttccaggagaaaaatgcactggatgactctgcacaccttttgtacgaagtggagcta
gagagcgagatgctacagtgtgtggaggaagtggagaggttgactcaacagaagcaaccc
caacctgaggaaatgccctctggccttggcaatgaggaggatgacatagaggagctggag
gaagaagaagaatttgatccatctcttccagagccactccctgaacaaatcaaatgtcta
aagatgtattttggacatagtcgcttcaagccagtacaatggaaagtaattcactctgtt
ctgaaggagaggcgagataaccttgttgtcatggcaacaggctatgggaaaagcctgtgt
ttccagttccccccagtgtactgtgttggcgtcagcattgttatctgtcccctcatcgct
ctcatggaggaccaagtgctccagcttgaaatgtccaacattccagcttgtttcctcgga
tctgctcagaccaaaaatgttttagccggcttgaaacaggggcaatacagagttgtatac
atgaccccagaatactgctcaggcaatgtgtctctactcgaacagctcgatagaagtata
ggaatctctttgatagcggtggatgaggctcattgtatctctgagtggggacatgacttc
agaggtgcatacaggagtctggggaacctgaagagaagtctacctaacgttcccatcgtg
gcgctgactgccactgcaagcccatccatcagggaggacatagtgaagagtctgaacctg
gagcgacccatcgtcacctgcacctccttcgaccgtcccaacctctacctggacgtcaac
cgcaagtctgggggcgtgtttcaggacctgaatggcttcctgaagaagtccaccgggggg
gattatgagtttgaagggtcctccattgtgtactgcccctcgaggaaagaggctgagcgt
gtgacctccactctgacctcgctgggtgtcacgtgtggcgtataccacgctggtctgggc
atcaaacagaggagggagacccagcatcgcttcatgagggacgaaatccagtgtattgtg
gctacagttgcttttggaatggggataaataaggctgacatcaggaaggtgatccattat
ggagcccctaaggagatggaatcttactaccaggagattggacgtgctgggagagatgga
cttccaagtgcctgccacgtcctgtgggcaccagcagatctaaaattaaacaggtttctc
atcaaccaggtagcaaacaacaaataccggggctacaagctcaaaatgatgggcaaaatg
gacttgtatctcaactcatccaagtgcagaaggaagctgatcctctcccactttgaagac
aaacagcttcgaaaggtgacctcgggcatcatgggaactgaccagtgctgtgataactgc
cgatctggggcggttaacagagtcggtgtaaatgatacagtcgacggcgggcgtcaggac
tacggtgtgttggcattccagctgatgggagccgtcagtgctatgggggagagatttggc
tccgcagcccccatcctgttcctccgtggatcatactctcaaagggttcctgagaagtac
cggtgccaccctctgtttggagctgggaaaagtgtctctgagccctgctggaaagccctg
tcacgggagctgatgaatgaggaatacctgaaggatgccaccggcgctagcaagttctgt
atcctctgtaaaatcacccccaaggggaggtggtggctgagtcgagccctggatgagaaa
cagagaaccctcctgctccagtcgagtgaccctgacctcaacacctggtctgcactaaga
caaaagcagaaccctgcagcgaccatcactaatgcccctgacagacagtattccacctct
cagaacaatgggttaaatgtctgttctaggccagtcaacagcaaatctatccagaagttg
gacatgtctactggcaggacgccaaccaagttgttgacccaggtagcgatgtccaaacca
cagccagaccccatctccgccagagagcttgaactgcagacggtgttgtacgccaagctg
gttgctgaacgacagaaactggccagtgagaaggacatcccaccggccatactggccacc
aacaaaatcctcctggatatggccaagatgaggccgtgcactgtgtccagtctgaagcag
gtggatggtgtgtctgaggcaaagtccagcatgcttacacccctcctcaaaaccataaca
agtttctgtgagcttcacaacttgaaagtggactcctcgactctagctgcagccccaggt
ccagagagcgttaggggggcggtgaccgggaggtcctcctctctacccaacagtattgcc
atcacctacagactgttccaggaggagggcaagagcatgaggcaggtgtctgatgtgcgc
agtttacccgttgctgtgctagaaactcagttgatccaggccttcagggcaaactaccca
ctggacacagagagagctggtctaacaaccgccatacgaactaccatcagccgcatcatc
cagtcacaccctgtcaactctgacctcagtgacatcaaggccattcgagccagagtcccc
gacgacatcagcaccttcctcatccagttgactgtggagctgctgcagagacaggggatg
cccacggcgccacctgctgtttccaccagcctacagcagcctgagctcacctggatagaa
ccagaggacaaaccggtgagagaaccttccttccacaagccagtgaggacagaaaaagcc
ctagcccagccagcccccatcaagctatccccagcccagccagccccagtggagccaccc
ccaccccaaccggtcggttggtcagcagtcggactcccagacgagatggagatgagtatg
gaagaggatgacctgttcagggatcttccaatgccagaggaagtgggtcccatcccagag
tatgtccttgcccctaaggctcttactgcagccaccaaggctgtcccccggaccagtgca
gtgaagctggcatcctggaaccaggagccgctggatgaggacacacaggaactcttcagt
gactccccccctcagaatgtcagccagccggcgaagagaaaactaccggactgggctgaa
ctaccaagaggttcaggttctttgacctgtacaaagaaaaccaaaaagaacaaaggactt
ttttcgtaa
DBGET
integrated database retrieval system
