Salmo trutta (river trout): 115160166
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Entry
115160166 CDS
T08542
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
stru
Salmo trutta (river trout)
Pathway
stru04514
Cell adhesion molecule (CAM) interaction
stru04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115160166 (lrrc4bb)
04517 IgSF CAM signaling
115160166 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115160166 (lrrc4bb)
Cell adhesion molecules [BR:
stru04515
]
Immunoglobulin superfamily
NGL family
115160166 (lrrc4bb)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
VEGFR1-3_N_Ig-like
Ig_2
LRRNT
DUF7617
Ig_6
Zwei_Ig_N
Motif
Other DBs
NCBI-GeneID:
115160166
NCBI-ProteinID:
XP_029566408
LinkDB
All DBs
Position
2:62582574..62610547
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AA seq
752 aa
AA seq
DB search
MRVVMVTSPSTPSPLLWLVQLLLWLHHHGPQVTEAAPPCPNPCSCSNQASRVICTRKSLV
EVPDSISVNTRYLNLQENTIEVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTLVPSQAFEYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLDYI
SEAAFEGLFNLRFLNLGMCGLKEIPNLTPLVRLEELELSGNQLGNVRPGSFQGLVSLRKL
WLMHSKVTVIERNAFDDLKNLEELNLSHNTLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSTSDSSNPFSYFTTVTVETVETNNGEDSAARQYINETYVPPDYLG
PTVSGGVLGKGRAGFTISPSRSSLSSLSPQATRAPEKAVTVSIMEVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPTRAIEIINVEDEIGAGAGSGISGGS
TMQSGCGGDGTLRMHHPEIVNLPNIGRSEHLNHYYKANHFNNNVMGLSIGTGAGVSTLSN
KNNPSPLNQQGQDIPISCTQVPISSAAFQTMSGNGANTNPLSVSPPLPMSLPMSPMGLHG
SIKGFMGQNQNPQMEPLLFKGNSKENVQETQI
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctctaccccttcccccctcctctggttggtccag
cttttactgtggctccaccaccatggacctcaggtaacagaggccgcgcccccatgtcca
aacccctgtagctgctccaatcaggcaagccgagtcatctgtacaaggaagagtttggtg
gaagtaccggatagtatttctgtgaacacaagataccttaacctacaagagaacacgatt
gaggtgatcaagtctgatacattcaagcacctgcggcatttggaaatcctgcagctttcc
aagaaccacatccgacaaatcgaggtgggcgcgttcaatggcctgcccaacctcaacacc
ctggagctcttcgacaaccgcctcacgctggtaccgtcgcaggcctttgagtacctcagc
aagctgcgggagctctggctacggaacaaccccatcgagacactgccggcgtacgctttc
caccgcgttccctccctgcgccgtctcgacctgggcgaactacggaagttggactacatc
tctgaggccgccttcgagggcctgttcaacttgcgtttcctgaacctgggcatgtgcggt
ctgaaggaaatccccaacctcacacccttggtccgactggaggagctagagctgtctggg
aaccagctggggaatgttcggcccggctcgttccaaggcctggtgtcgctgcgcaaactg
tggctcatgcactccaaggtgacggtcattgagcgcaatgccttcgacgacctgaagaac
ctggaggaactcaacctgtcccacaacaccttgcactcgctgccccatgatctcttcacc
ccgctgcaccagttggagcgggtgcacctcaaccacaacccctgggtgtgcaactgcgat
gtcctgtggcttagctggtggctgaaggagacggtgcccagtaacaccacatgctgtgcc
cgctgccacgcgcccccaggcctgaagggccggtacattggtgagctggaccagagccac
ttcacatgctacgctcccgtcattgtagagccgcccactgacctcaatgtcacagagggc
atggctgccgagctgaagtgtcgcactggcacctccatgacgtctgtcaactggctcacc
ccaaatggcaccctcatgacgcatgggtcgtaccgcgtcaggatctcagtccttcacgat
ggaaccctgaatttcaccaatgtgactgtgcaggacacaggccaatacacctgcatggtg
accaactccgccggcaacactacggcaaccgcagtgctcaacgtgtccacctctgactcc
agcaaccctttcagctatttcaccaccgtcactgtggaaactgtggaaactaacaatggg
gaggattccgctgcaaggcagtacatcaacgaaacctatgtaccgccagattacctgggt
cccactgtttcaggaggggtactgggtaaaggcagggctggattcaccatatctccatct
cgctcatctctctcctccctgtccccgcaagccaccagagctcctgaaaaggcagtcaca
gtgtcgataatggaggtcacgaacatccctggcctggacgacgtgatgaagaccaccaag
atcatcattggctgcttcgtggccatcaccttcatggcggccgtgatgctggtggtcttc
tacaagctgaggaagcagcaccagctgcacaagcaccatggccccacccgcgccatcgag
atcatcaatgtggaggatgagatcggtgccggggccgggagcggcatctcagggggatcg
accatgcaatccgggtgcggaggagacggaaccttgaggatgcatcacccggaaatagtc
aaccttcccaacatcgggcgatcagagcatcttaaccattactacaaggccaatcatttc
aacaacaacgtgatgggtctgagcattgggacaggggcaggcgtcagtactctaagcaac
aagaacaacccgtccccactgaaccagcaaggccaggatatccccatctcctgtacacag
gttccaatctcctcagccgctttccagaccatgtccggaaatggcgccaacaccaaccct
ctttctgtttccccacctctgccgatgtccctccccatgtcccctatgggattacacgga
tcgatcaagggtttcatgggccagaaccagaatccacaaatggagcctcttttgttcaag
ggaaactcaaaggaaaacgttcaagagactcaaatctga
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