Salmo trutta (river trout): 115160179
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Entry
115160179 CDS
T08542
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1
KO
K20100
YTH domain-containing protein 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115160179 (ythdc1)
Spliceosome [BR:
stru03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115160179 (ythdc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
115160179
NCBI-ProteinID:
XP_029566423
Ensembl:
ENSSTUG00000018130
UniProt:
A0A673Z6N8
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All DBs
Position
23:48968144..49013384
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AA seq
685 aa
AA seq
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MAVDRRDEKEGELNVLDDILTEAPDQDDELYNPESEHHVNQKKGSKRKNDRGDDHELKRL
RPSAHTTTRQATKRSALSAGASGKKLVNLRGGRHPSEYKNEDYYDDRKTHSIRAGGGQRG
DPPKAGHLDKPLGRRREPDRHRIKPLMPELTTEKLMRPNEGSVGRVSTSSKEEAEEEASD
QETGSTAESSEGDRSNMEGEEVMEEEEEEEEEGEKGPEEDEEEEEEEYEQEEGDQRVVNE
PPDYDTRSEASDSQSDSVSFSEGESVHSGSGSDASGSEKKHEKLSSSVRAVRKDQTSKLK
YILRETRFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKF
QGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIHWICRRELPFTKTAHLSNPWNEHK
PVKIGRDGQEIEPGCGMQLCMLFPQDESIDLYQVIHKMRHKRRMPSEPRSRGRPPHREPA
RGDLGRRRPEEYDIHNRKRPRIDYPAEFPQRPGFMPVPRNPPVDRRFPTGVRRDVFLNGS
YNDYMREFHHTIGPPPPWQGMAPYPGMEQPPHHPFYQHHPPPPQAHPPYTGHHPVPHDAR
FREKRVVRSFSSTLHDYDMRVDDFLRRTQAVVTGRRSRPRERDRQRERERPRDARRDRDR
DRGRERDRERDRIRDREKERGRYRR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacagacgagacgagaaagagggagagctcaacgtgctggatgacatcctc
accgaggcccctgaccaggatgacgagctctataatcctgagagtgaacaccacgtcaac
cagaagaaaggatctaagaggaagaatgatcgaggggatgaccacgagctgaaacgtctc
cggccctcagctcacaccaccaccagacaggccactaaaagatctgccctctcggccggt
gctagcgggaaaaaactggtcaacctcaggggtgggcggcacccctccgaatacaagaac
gaagattactacgacgaccggaagacccattccatccgagctggtggtgggcagaggggg
gaccctcccaaagcaggccaccttgacaagcctctgggtcgcaggagagagccagacaga
cacaggatcaagcctctcatgcctgagctaactacagagaagctgatgcgccccaatgag
gggagtgttggcagggtcagcacttcctccaaggaagaggcagaagaagaggcgtcagac
caggagacgggcagcacggccgaatcctccgagggagacaggtccaacatggagggagaa
gaggtgatggaggaggaagaagaggaagaggaggagggagagaagggcccagaggaagac
gaggaagaggaggaggaagagtatgaacaggaggagggggatcagagagttgtgaatgaa
ccgcctgattacgacactcgcagcgaagccagcgactcccagtctgattctgtgtccttc
tctgagggggagtcggttcactctggttctgggtctgacgcctcaggttctgagaagaag
catgagaaactatcttcctctgtccgagctgtccgcaaggaccagaccagcaagctgaag
tacatcctacgagaaacacgcttcttcctgatcaagagcaacaaccatgagaacgtctcc
ctggccaaggctaagggtgtgtggtccactctgcctgttaatgagaagaagctgaacgct
gccttccgttctgcccgcagcgtcatcctggtcttctctgtcagggagagtggaaagttc
caaggttttgccaggctgtcctcggagtcccatcatggagggtctcccatccactgggtc
ctgcctgctgggatgaacgccaagatgcttggtggagtgtttaaaatccactggatctgc
agacgtgagttaccgttcactaaaacggctcacctctccaacccgtggaatgaacacaag
cctgtaaagatcggccgagatggacaggagatcgaaccaggatgtgggatgcagctgtgc
atgctgttcccccaggacgagagcattgacttgtatcaagttattcataaaatgcgacac
aagcggaggatgccttcggagccacgttctcgaggacgcccgccgcacagagaacccgcc
cgaggcgacctgggaaggcgtcggcccgaggaatatgacattcacaacaggaaacgcccg
aggattgactatccagccgagttcccacagagaccaggctttatgccagttccacgtaac
ccaccagttgaccggcgcttcccaactggagtgagaagagatgtgtttctcaatgggtcc
tacaacgattacatgagagagttccaccacaccattgggccgccgcctccttggcaagga
atggcaccgtatcctgggatggagcagccacctcaccacccgttctaccagcaccatcct
cctcctccccaggcacatcccccatacactgggcaccaccctgtcccgcacgacgcccgc
ttcagggagaagagagttgtacgctccttcagttctaccttgcatgactatgacatgagg
gtggatgacttcctgagacggacccaggccgtggtaacgggtcgtcgcagccggccccga
gaacgagacaggcagagggagcgagaacggcctcgggacgcccggcgggaccgcgacaga
gaccgtggacgcgaacgtgaccgagagagagacaggatcagagacagggagaaggagagg
gggcgttacaggagataa
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