Salmo trutta (river trout): 115160554
Help
Entry
115160554 CDS
T08542
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like
KO
K15195
AF4/FMR2 family member 3
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115160554
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
115160554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
115160554
NCBI-ProteinID:
XP_029566579
Ensembl:
ENSSTUG00000008850
LinkDB
All DBs
Position
24:38385759..38410374
Genome browser
AA seq
1300 aa
AA seq
DB search
MVLQMTDPEQSASWTGNNSLSEQHTHTHGGRVRRSGSDSSGSDSSGSDSSSESEEESSSQ
RLCSLSPETHSDPGTPTDAQSLGCTEETDHPPTTQWQLDKWLKKVRKKSSWDSSNRDHTQ
RATEHSSPSPDPHRAPSPARSWGTREDYSPSQSPVPSPHFNYSPRHSPRPSPGCSPCPSP
CPSPRHSPIPSPVTGVCLSPSRSRSPSPIPRHPPKSPSPSLTQSSSRHYPKVRSLHQESF
RPLTRPSLTSSPSHRPKIRIAPAPSIETKSKLRHSSSPQPPLQHSSRPKPKQSQSVPTPK
NTAKAAPALSAEPSHRPRPSPNSSPRLHSQPRLKHNPIPALKTSQHLTTSGQRPKESSRL
SHNSNSNPRPKFGPSLTISLSTSPSPTPRAKTLPPADPSREASSRVGHSSKSTPKPHSWP
ISKAGSGPSSRSSPSPRPKVKSRENPAPHAKHPQRKPQSREREREVDNQRETQAADRKAD
RQTEGRGRGNLERQGERQEEKQGERRLAEDKLLRRPWVQSSEEEEDVEERKRRREESERE
EEKRRRRKEQQQQRGEWQAVQPKQRPHTNSERHRNPIDPQRHGTKKKRRRKSEEEERESQ
PDPSLPPSPSSPTPVIPPTDSSSSSSSSSESDSEPSLPPNVAKVPADSTSSQRPIPRRGH
QGPGRPSDSRPGVLYPTATSNQDHGPQSQAKQKLYTLVPFGRSEQAPASHRGLRNLVVQL
NLSLLSRVPDTTTDTQASHKHPSSSSSSSKQKEAMRHLYTPETEGGDSRRKRKSENGIQH
HRESKRSNSHTNGPSAHTESTANRESKRSNSHTNGPSAHTESTANRESKRSNSHTNGPSA
HTESTANRESKRSNSHTNGPSAHTESTANRESKRSNSHTNGPSAHTESTANRESKRSNSH
TNGPSAHTESTANRESKRSNSHTNGPSAHTESTANRESKRSNSHTNGPSAHTESTANRCL
DPHTDARHNGFLEDYLDSKRPLSPLSPLSDTPDLTKPPIKTQPPVQHYTNSEVPRTHAKM
EVECVGVSGKPPPKCESWGPPLQRAGSQRGTVLNHEPPHHAEYYMHEAKRMKHRADAMVD
KLGKAVNYVDAALSFMECGKAMEEGPLEDKSPYTMYTETVELIRYAMRLKNHSGPGARQE
DKQLAVLCFRCLALLYWQMFRLKKDQAMKYSKALLDYFKSSPKVPTTPPIWSDSGKGTGG
PPSSLSPSPSALPLGSSPTSLINIPLRIHQMAANHLNITNNVLYSYEYWELAESLVRDNN
EFFNYLNTLSGPLTLHSSIAHAVQYTRQGLQWIRISANVG
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggtgctacagatgaccgaccctgagcagtcagcctcctggactggtaacaatagtctg
tcggagcagcacacacacacacatggtgggagggtgagacgttcaggctcagactcttca
ggctcagactcttcaggctcagactcctccagtgagtcggaggaggagagcagtagccag
cgcctttgtagcctcagcccagaaacacactcggatcctgggacgcccaccgacgctcag
tccctcggctgcaccgaggagacagatcacccccccaccactcagtggcagctggataag
tggctgaagaaagtcagaaaaaaatcctcctgggattccagcaaccgagaccacacccag
agagctacagagcacagctcgccctccccagacccccacagagccccgtccccggccaga
tcctgggggaccagagaggactacagccccagccagagccctgttcccagcccacacttc
aactacagccccaggcatagccctcggcctagccctggctgcagcccctgtcccagtcct
tgccccagcccaagacacagtcccatccctagcccggtcaccggtgtctgtctgagcccc
agccgcagccgcagccctagccccataccccgacacccccctaagagtcctagtcccagc
cttactcagtctagctcccgtcactatcctaaggttcggagtcttcatcaggaaagcttc
aggcctctcacgcggcctagcttaacatccagtccgagccatagacccaaaatcaggatc
gcacctgctcccagcattgagaccaagagcaaactgaggcacagttcctctccccagcct
ccgcttcagcacagctccaggcctaaacccaaacagagccagtctgttcccactcccaag
aacacagccaaggcagcccctgctctgagcgctgagccgagccacagacccagacctagt
cccaactccagtcccaggcttcattctcagcctaggttgaaacacaaccccatcccagcc
ctcaaaaccagccaacacctaacaacctctggacaaaggcccaaggagagtagcagactc
agccacaattccaactccaaccccaggcccaagtttgggcctagtttgacaatcagcctc
agtaccagtcccagtcccacacccagggccaagaccttaccacccgcagaccctagcaga
gaggccagcagcagagttggtcacagttccaaatcgactcccaagccacattcttggccg
atctccaaagctggttctgggcctagctctagatccagccccagtcctagacccaaagtc
aagtcccgggagaaccctgctccacacgcaaagcatccacagaggaagccccaatccagg
gagagagaacgggaggtggacaaccagagagagacccaggcagcagacaggaaggcagac
aggcaaacagagggaagggggaggggtaatttagagagacagggagagaggcaggaggag
aaacagggagagagaagactggcagaggataagttgctaagacgcccctgggtccagagt
tcagaggaggaagaggacgtagaggagagaaagaggaggagggaggagagcgagagggag
gaggagaagaggaggaggaggaaggagcagcagcagcagagaggtgaatggcaggcggtc
cagcccaagcagagacctcacaccaacagcgagcgacaccgcaatcccattgatccacaa
cgccacgggaccaagaaaaagaggaggaggaagagtgaggaggaagagagagagtctcag
ccggacccttcccttccgccgtcgccctcctcccccactcctgtcatccctcccacagat
tcctcctcttcatcatcttcctcatcagagtctgactcggagcccagtctgcctcccaac
gtcgccaaagtcccagccgactccacgtccagccagcgtcctatccccaggagagggcac
cagggccctgggaggccttcagacagcaggccaggagtgctctaccccactgccacatcc
aaccaagaccacggaccgcagagccaggcaaagcagaaactctacaccttggtcccgttt
gggcgtagtgagcaggccccagcctcccatcgaggcctgaggaatctggtggtgcagtta
aacctctccctgctcagcagagtgcctgatactacgacagacacccaagcctctcacaaa
cacccctcctcttcctcttcctcttccaagcaaaaagaggccatgagacacctgtacacc
ccagagacagagggaggagacagcaggaggaaacggaagtcagagaatggaatccagcac
cacagagagagtaagcggagtaactcccacaccaatggcccctcagcccacacagagtct
acagctaacagagagagtaagcggagtaactcccacaccaatggcccctcagcccacaca
gagtctacagctaacagagagagtaagcggagtaactcccacaccaatggcccctcagcc
cacacagagtctacagctaacagagagagtaagcggagtaactctcacaccaatggcccc
tcagcccacacagagtctacagctaacagagagagtaagcggagtaactctcacaccaat
ggcccctcagcccacacagagtctacagctaacagagagagtaagcggagtaactcccac
accaatggcccctcagcccacacagagtctacagctaacagagagagtaagcggagtaac
tctcacaccaatggcccctcagcccacacagagtctacagctaacagagagagtaagcgg
agtaactctcacaccaatggcccctcagcccacacagagtctacagctaacagatgtcta
gacccccacacagatgccagacacaacgggttcttggaggactacctagacagtaagagg
ccactgtcccccctgtcccctctctctgacaccccggaccttaccaagcctcccatcaaa
acacagcccccagtgcagcactacacaaacagtgaggtgcccaggacccatgctaagatg
gaggtggagtgtgtaggtgtgtcagggaagcccccgcccaagtgtgaatcctggggacct
cctttacaacgggcagggagccagagaggaactgtactcaaccatgaacccccacaccat
gctgagtactacatgcatgaggccaagagaatgaagcaccgtgcagatgccatggtggat
aagctggggaaggcagtgaactatgtggatgctgctctgtccttcatggagtgtggcaaa
gctatggaggagggaccgctggaggacaagtctccctataccatgtacacagagacggta
gagctcatcaggtatgccatgaggctgaagaaccactctggccctggggccagacaggaa
gacaaacagttggccgtactgtgtttccggtgccttgctctcctgtactggcagatgttt
cgtctgaagaaggaccaagccatgaagtactccaaagctctactggactactttaagagt
tctcccaaagtgccaactacaccccccatctggagcgactcaggaaagggcacagggggg
cctccctcctctctctcccccagcccctcagccctccccctgggcagctcccccacttcc
ctcatcaacattcccctacgtatccaccagatggcagcaaaccacctgaacatcaccaac
aatgtcctctacagctacgagtactgggagctagcagaaagcctggtcagagacaacaat
gagttctttaactacctgaatacactgtcagggccgttgactctccacagtagtattgct
catgcagtccagtacaccagacagggtctgcagtggatacgcatcagtgccaacgtgggc
tag
DBGET
integrated database retrieval system
