Salmo trutta (river trout): 115160738
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Entry
115160738 CDS
T08542
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stru01002
]
115160738
Peptidases and inhibitors [BR:
stru01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
115160738
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Secretin_N_2
Motif
Other DBs
NCBI-GeneID:
115160738
NCBI-ProteinID:
XP_029566953
Ensembl:
ENSSTUG00000028249
UniProt:
A0A674B0L2
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Position
24:14082926..14131907
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AA seq
1243 aa
AA seq
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MMFPTVTWLLFVAGLLGVWSQDYYEERTMNKRPRGRGAQLRAAATAPNGQKHNRQALHMN
TAILDEDCGLELSFLLDSSESAKENHEQEKQFAMDVVDKLQAVRLQTGRSLSWKVALLQY
SSHVIIEQTFKQWRGTDNFKSHITPILYIGHGTYTTYAITNITKMYLEESIPGSIKVSVL
LTDGISHPRNPDIFSAAADAKNQGVKFFMVGITRAANEPANVAQLRLLASSPASRYLHNL
QDTDIVEKVLTEITDLADKGCPLAQRCACEKGERGLSGSTGKKGRPGDDGAPGLKGSKGE
GGLSGLPGRDGGEGKPGYKGEMGERGECGIPGIKGDRGPEGPMGSRGVRGLQGLPGPQGD
MGPEGPQGKKGDRGLTGPPGIQGETGIGLPGPKGDLGYQGRLGPPGPPGLGEHGQPGPQG
PQGVQGEKGPHGEGLPGPKGDRGLDGPRGPRGQTGAGIKGEKGEFGPPGHPGLVGLTGAG
IQGEKGVEGPRGPPGGRGPQGEGLPGPKGDQGLPGELGVTGERGVGEPGPKGEPGAYGLA
GLPGLPGEDGAPGQKGEFGIAGLRGSEGAAGIGIQGEKGDQGQRGIRGLHGPSGMTGPSG
AKGEPGTPGRLGMSGLPGRAIAGPKGDLGPPGPSGPIGETGYGLPGPKGDRGNSGPPGQF
GPKGEGFPGPVGPPGLPGLQGEQGPEGVGIPGPKGDIGFRGLPGLPGPTGEGVQGPPGNI
GRPGPLGPTGPPGEGLQGPKGGQGSQGVTGPRGPSGEGFPGAKGDRGLQGERGNKGGKGD
LGDHGVHGESGRPGIKGEAGLTREDIIKLIKEICGCGVKCKEMPMELVFVIDSSESVGPE
NFGIIKDFVTALVDRTTVGRNTTRIGLVLYSLDVKLEFNLARYMTKQDVKEAIRKMPYMG
EGTYTGTAIRKATQEAFYSARTGVRKVAIVITDGKTDKREPVKLDIAVREAHAANIEMYA
LGIVNTSDTTQAEFLRELNLIASDPDNEHMYLIDDFNTLPALESKLVSQLCEDENGALVM
NRIANGFGTNGNNGYGNHRYVLEAHGNNGYVDSSYGNTYHEDPILNPSRRTSSQSYIRGR
GDTFALPLNAGPLPLQVEDDEEGEDLDIRTHVRGGIVAVVNKTVSILPARESSHSNTTVS
SSSSGSASSSSGTSGSASSTSSGQFRPVSIPNTIFPQESVQLDSRCKLSLDQGTCREYKI
RWYYDQQANSCAQFWYGGCEGNANRFETENECKKICVLSRTAG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccctacagtgacatggctcctgtttgtagcaggcctgttgggtgtctggtct
caggactactatgaggagagaacaatgaacaagagacccagaggcaggggggcccagctg
cgagctgcagccactgcacctaacgggcaaaaacataatagacaagctctgcacatgaac
acagccattttagatgaggactgcggtctggagctttcctttctgcttgacagctctgag
agtgccaaggagaaccatgagcaggagaagcaatttgccatggatgtggtggacaagctc
caggctgtccgtctgcagaccggtcgcagtctgagctggaaggtggccctgctgcagtac
agcagtcacgtcatcatcgagcagacctttaagcagtggagaggcactgacaacttcaag
tcccacatcacccccattttatacatcggtcacggcacctacaccacctacgccatcacc
aacataactaagatgtacctggaggagtccatcccaggcagcatcaaggtgtccgtccta
ctcactgacggcatctcccaccccaggaacccagacatcttctcagctgccgccgacgcc
aagaaccagggggtgaagttcttcatggtgggcatcacccgtgcagccaatgagccagcc
aacgtggcccagctccgtctgttggccagctctcctgcttcccgatacctccacaatcta
caggatactgatattgtggagaaagtcctcacggaaattactgacctggctgacaagggg
tgtcccctggcccaacgatgtgcctgtgagaagggcgagagagggctcagtggttcaact
ggaaagaagggtcgcccaggagatgatggcgcccctggtcttaaaggatcgaagggagag
ggaggactaagtggacttccaggtcgggatggcggagagggaaaacctggttacaaagga
gagatgggtgagaggggcgagtgtggcattccaggaattaaaggagacaggggtcctgag
ggtccaatgggctccagaggtgtcagaggtctccagggtttacccggaccacagggtgac
atgggacctgagggccctcaaggaaagaagggtgaccggggtctaactgggccgcccgga
attcagggagaaactggtattgggcttcctggaccaaagggtgatctgggataccaggga
agactcggcccccctggtccgccagggctgggtgaacatggccagccaggacctcaaggg
ccacaaggtgttcaaggagagaaaggaccccatggcgaggggctccctggaccaaaggga
gaccgtgggctggacggaccgagggggcctagaggacagacgggtgcaggaatcaaagga
gaaaagggtgagttcgggcctccaggtcatccaggacttgttggacttacaggagcgggc
atccagggggagaagggagtggagggtcccaggggtccacctggcggcagagggccacaa
ggagagggcttacctggacctaagggcgatcaaggtttaccaggagagcttggagttaca
ggggaaagaggcgttggtgagccagggccaaagggtgagcctggtgcatatggcctggct
ggcttacctggtcttccaggagaggacggggctccaggacagaagggtgagtttggtatc
gctggcctcagaggttctgagggtgcagcagggatcggcatccagggcgagaagggagac
cagggtcagaggggcatccgtggattacatggaccttctggcatgaccggaccctcgggg
gcaaagggggagcctggcacaccggggcgactgggcatgtcaggactaccgggacgggcc
attgcaggtcctaagggtgatctaggccctcctggtccgtctgggcctattggagagaca
ggctatgggctgcctgggccgaagggcgaccgcggtaattctggtccaccaggtcaattt
gggcccaaaggtgaaggtttccctggaccagtgggtcctccaggtcttccgggtctacag
ggagagcagggccctgagggcgttggcatcccaggacctaagggagacattggcttcaga
ggattgccaggtttgccaggcccaacgggagagggtgtgcaaggaccaccgggtaacatt
ggaaggccaggaccccttggtccaacaggtccaccaggagaaggtttgcagggccccaag
ggtgggcaggggtctcagggtgtgacagggccaaggggaccctcgggggaaggattccca
ggagctaagggtgaccgtggcttgcagggtgagagaggaaataagggcggaaagggagat
ctgggagatcatggggttcatggagagtctgggagaccaggaataaaaggtgaagccggc
cttacaagagaagacatcattaaattgatcaaggaaatctgtggatgtggagtgaagtgc
aaggagatgccaatggaacttgtattcgtcattgacagctcagagagtgttggcccggaa
aactttgggattatcaaggacttcgtcacagcgttggtagaccgtaccactgttggacgt
aacaccaccagaattggactggtcctgtacagtctggatgtcaaactagagttcaacctg
gcacgctacatgaccaagcaggatgttaaggaggccatcaggaaaatgccctacatgggt
gagggcacctacactggcactgccatccggaaggctacccaagaagccttctacagtgcc
cgtactggagtcaggaaggtggccattgtcatcacagatggaaagacagacaaacgagag
cctgtgaagctagacattgctgtgagggaggcccatgctgccaacattgagatgtatgcc
ctggggattgtcaacacctcagatacaacccaggccgagttcctccgtgagctcaatctg
atcgcctcggaccctgacaatgaacatatgtacctcatcgacgacttcaacactctacca
gctctggagtcaaaacttgttagccagttatgtgaggatgagaatggagcccttgtgatg
aatcgcatcgctaatggctttggaaccaatgggaacaatggctatgggaaccacagatat
gtactggaagcccatgggaataacggctatgtggacagcagctatggaaacacctatcat
gaggatcctatcctaaatcctagtagacgtaccagttcccagagttacatcagaggccgt
ggagatacctttgctctgcccctcaacgctggaccactcccattgcaggtggaggatgat
gaggagggtgaagatttagacataaggacccatgtgcgaggaggtattgtggctgtagtt
aacaagacagtatccatcctccctgcaagggaaagctcccactccaacacaactgtttca
tcatcatcatcaggatcagcatcatcatcctccggaacatcgggttcagcttcatccacc
agctcaggccaatttcggccggtatcaattcctaatacaattttcccccaagagtctgtc
cagcttgattcccgctgtaagctgagtttggaccaaggcacctgtcgagaatataaaatc
cggtggtattatgaccaacaggccaattcatgtgcacagttctggtatggaggctgtgaa
ggaaatgctaaccgctttgagaccgagaatgaatgcaagaagatctgtgttctatctaga
acagctggttaa
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