KEGG   Salmo trutta (river trout): 115160759
Entry
115160759         CDS       T08542                                 
Symbol
itga6
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
stru  Salmo trutta (river trout)
Pathway
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04514  Cell adhesion molecules
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115160759 (itga6)
   04514 Cell adhesion molecules
    115160759 (itga6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115160759 (itga6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115160759 (itga6)
   04810 Regulation of actin cytoskeleton
    115160759 (itga6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stru04147]
    115160759 (itga6)
   04515 Cell adhesion molecules [BR:stru04515]
    115160759 (itga6)
   04090 CD molecules [BR:stru04090]
    115160759 (itga6)
Exosome [BR:stru04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115160759 (itga6)
  Exosomal proteins of breast milk
   115160759 (itga6)
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin alpha subunits
   115160759 (itga6)
CD molecules [BR:stru04090]
 Proteins
  115160759 (itga6)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 115160759
NCBI-ProteinID: XP_029566990
Ensembl: ENSSTUG00000038783
LinkDB
Position
24:14628231..14651096
AA seq 1093 aa
MVLPKRYFPIHVALFCLLEWTHISAFNLDTLNVLRKDGEPGSLFGFSLAMHRQFLPSDKR
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYVLSQDLTIDTSSDEDGGNWKFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEKGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGFSITKGRGLTIVSGAPRANHSGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDIGGAVYVYIN
QAGKWAKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTMPAQILEGKPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPASYSPKLTIRYAFEAEADRRKQGLI
SRVLFLNKSRTDQDFQSTGNLDLRGQNKRACTKTKIRLQDNIRDKLRGIPIEVSVEILGT
KRQKRQNALPQLVPILDNSQPSKVVTEVNFLKEGCGNDNICQSNLQLEYRFCSKEPNQEV
FPPLQMQNGLPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGMFPNALSFSGFRSQKTTR
DKPVLCLANQNGSQTECELGNPFKTDSEVTFYIILSTAGISLNTTEIDIDLELQTTSTQE
KTGSVKARAKVVIEMLLSVAGIARPSQVYFGGDVKGESAIKTEEEIGSLIDYEFRIINLG
KPLKSFGTATLNVQWPKENVDGKWLLYLVKISTTGLEEIPCSPETEINSLKHVQESSTSR
KKREAGGKKSGGKISLSDQRKHKILMCGNGYDARCVVIKCPLLGLDSSAVISLRSRLWNA
TFLENYASLNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVAQFGGVPWWIIL
VAVLAGILMLALLVFLLWKCGFFKRSKHDDSVPRYHAVRIKKEACQFKDGKAKMDSFEKK
QWMTSWNENESYS
NT seq 3282 nt   +upstreamnt  +downstreamnt
atggttctcccaaaaagatattttccaattcatgtggcacttttttgtttgctagaatgg
actcatatatcagccttcaacctggataccttgaatgtcctgaggaaagacggtgaaccg
ggcagtttatttggattctctctagccatgcaccggcaatttcttccttcagataagaga
atactgttgattggagcaccaagagccaaagctctggccaaccagagagccaacataacc
ggaggcctgtacagttgtgacatcaccacagaatccgatgactgcgatcgcatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgtgctcatcgctaccagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggccgctgctacgtcctgagtcag
gacctcactattgatacgtcctctgatgaagatggagggaactggaagttctgtgaggga
cgtgccagaggccatgagaggtttggctcatgccagcagggtctggctgccacgttcacc
aaggactaccactacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaagggattttatgatgatgggccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ctaggattttcccttgattctggctttagcatcaccaaggggcgtggcctaactattgtg
tctggggcaccacgagccaatcactctggggctgtggtcctgttgcgaaaagagaatgaa
gcgtcagcaagactctccccagagtacattctagaagggcctggactggcatcgtctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagacattggaggagctgtttatgtctacatcaac
caggcaggaaagtgggccaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggagaacatcggtgacatcaatcaggactcctatcaagacatcgcc
gttggagcgccctacgctgacgctggtgcaggaaaagtgtacatttaccatggttctgct
aatggaatcaacaccatgcctgcacagatccttgagggaaagcccaacaacatcagatta
tttggatattctctggctgggaacatggatttagataagaattcctatcctgatatagcc
attgggtcgctctcagatacagttctcgtttacagggcaaggccaattattagtatcaag
aaggatgtcaaaattactccgaaggaaattgacttcacaaagaaaacctgtggcaacagt
atctgtttgaccgtggaagcatgcttcacctataaagcaaaccctgcatcatacagccca
aaactaactatccgctatgcatttgaggctgaagcagatcgcaggaagcaagggctgatc
tctagggtcctgtttctgaacaagtctcgcaccgaccaggacttccagtccaccggaaat
ctggacctccggggacaaaacaaaagagcgtgtaccaagacaaaaatcagactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtgtcagtggagatcctgggcacc
aagcgtcagaagaggcagaacgctctcccccagcttgtgcctattcttgacaactcccag
ccaagcaaggtcgtcactgaggtgaacttcttaaaggagggatgtggaaatgataatatt
tgccagagtaacttacaactggagtacagattctgctccaaagagcccaaccaagaggta
ttccctccattacagatgcagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaggaacagaaatggggatgatgcccatgaggctaagctg
gtggggatgttccctaacgctctctcattctccggctttcgctctcagaaaactacgagg
gacaaaccggtgctttgtttagccaatcagaatggctcccagacagagtgtgaactgggg
aatccattcaaaacagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaataccacagaaatcgacattgaccttgagcttcaaacgaccagtacacaggaa
aaaacgggcagtgtgaaagcaagggcaaaagtagtgattgagatgttactttctgttgca
ggaattgcgagaccctcccaggtgtattttgggggcgatgtgaaaggagagagtgccatc
aagacagaagaggagattggcagtttgatcgattatgaatttaggataatcaatttgggt
aagccgttgaagtcctttggcacagccacgctgaacgtccagtggcccaaagagaatgtg
gatgggaagtggctgttatatctggttaagatcagcaccactggccttgaagagatcccc
tgctccccagagactgagatcaactctctcaaacacgttcaggagtctagcacatctagg
aaaaagcgtgaagctggaggcaaaaaatctggaggcaaaatctctttatcagaccaaaga
aagcacaagattttgatgtgtggcaatggctacgacgctagatgtgtggtgatcaagtgc
cctctactgggcttggacagtagtgcagtgatttctctaaggtcccgtctgtggaacgcg
accttccttgagaattacgcgtctttgaactatcttgatataattgtgaaagcttccatc
agccttgatgcacctgcaaagaatatggttctcaggaatgctgagactcaggtgagagtc
acagtgtttccagagaaggcggtagcccagtttggtggagtcccatggtggatcatcctt
gtggctgtcctggctggtattctgatgttggcgttgctagtgtttctactctggaagtgt
ggatttttcaaacgctcaaaacatgatgacagcgttccaagataccatgccgtacggata
aagaaggaggcttgtcagtttaaagacggaaaagccaagatggattcctttgagaaaaag
cagtggatgacaagctggaatgagaacgagagctactcatga

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