Salmo trutta (river trout): 115160759
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Entry
115160759 CDS
T08542
Symbol
itga6
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
stru
Salmo trutta (river trout)
Pathway
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04514
Cell adhesion molecules
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115160759 (itga6)
04514 Cell adhesion molecules
115160759 (itga6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115160759 (itga6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115160759 (itga6)
04810 Regulation of actin cytoskeleton
115160759 (itga6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115160759 (itga6)
04515 Cell adhesion molecules [BR:
stru04515
]
115160759 (itga6)
04090 CD molecules [BR:
stru04090
]
115160759 (itga6)
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115160759 (itga6)
Exosomal proteins of breast milk
115160759 (itga6)
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin alpha subunits
115160759 (itga6)
CD molecules [BR:
stru04090
]
Proteins
115160759 (itga6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
115160759
NCBI-ProteinID:
XP_029566990
Ensembl:
ENSSTUG00000038783
LinkDB
All DBs
Position
24:14628231..14651096
Genome browser
AA seq
1093 aa
AA seq
DB search
MVLPKRYFPIHVALFCLLEWTHISAFNLDTLNVLRKDGEPGSLFGFSLAMHRQFLPSDKR
ILLIGAPRAKALANQRANITGGLYSCDITTESDDCDRIDFDNEEDVRVENKENQWMGVTV
NSQGPGGKIVTCAHRYQRRLFVDTAQESRDITGRCYVLSQDLTIDTSSDEDGGNWKFCEG
RARGHERFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLLEKGFYDDGPY
EVGDENRLDPDLVPVPANSYLGFSLDSGFSITKGRGLTIVSGAPRANHSGAVVLLRKENE
ASARLSPEYILEGPGLASSFGYDVAVVDLNGDGWQDIVVGAPQFFMKEGDIGGAVYVYIN
QAGKWAKITPIRLNGTKDSMFGLAVENIGDINQDSYQDIAVGAPYADAGAGKVYIYHGSA
NGINTMPAQILEGKPNNIRLFGYSLAGNMDLDKNSYPDIAIGSLSDTVLVYRARPIISIK
KDVKITPKEIDFTKKTCGNSICLTVEACFTYKANPASYSPKLTIRYAFEAEADRRKQGLI
SRVLFLNKSRTDQDFQSTGNLDLRGQNKRACTKTKIRLQDNIRDKLRGIPIEVSVEILGT
KRQKRQNALPQLVPILDNSQPSKVVTEVNFLKEGCGNDNICQSNLQLEYRFCSKEPNQEV
FPPLQMQNGLPVISLSDQKDIALEVTVRNRNGDDAHEAKLVGMFPNALSFSGFRSQKTTR
DKPVLCLANQNGSQTECELGNPFKTDSEVTFYIILSTAGISLNTTEIDIDLELQTTSTQE
KTGSVKARAKVVIEMLLSVAGIARPSQVYFGGDVKGESAIKTEEEIGSLIDYEFRIINLG
KPLKSFGTATLNVQWPKENVDGKWLLYLVKISTTGLEEIPCSPETEINSLKHVQESSTSR
KKREAGGKKSGGKISLSDQRKHKILMCGNGYDARCVVIKCPLLGLDSSAVISLRSRLWNA
TFLENYASLNYLDIIVKASISLDAPAKNMVLRNAETQVRVTVFPEKAVAQFGGVPWWIIL
VAVLAGILMLALLVFLLWKCGFFKRSKHDDSVPRYHAVRIKKEACQFKDGKAKMDSFEKK
QWMTSWNENESYS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggttctcccaaaaagatattttccaattcatgtggcacttttttgtttgctagaatgg
actcatatatcagccttcaacctggataccttgaatgtcctgaggaaagacggtgaaccg
ggcagtttatttggattctctctagccatgcaccggcaatttcttccttcagataagaga
atactgttgattggagcaccaagagccaaagctctggccaaccagagagccaacataacc
ggaggcctgtacagttgtgacatcaccacagaatccgatgactgcgatcgcatcgatttt
gacaatgaagaggatgtgagagttgagaacaaggagaaccagtggatgggggtgacagtt
aacagccagggccccggagggaagattgtgacctgtgctcatcgctaccagagacgtctg
tttgtggacactgctcaggagtcccgtgacatcacaggccgctgctacgtcctgagtcag
gacctcactattgatacgtcctctgatgaagatggagggaactggaagttctgtgaggga
cgtgccagaggccatgagaggtttggctcatgccagcagggtctggctgccacgttcacc
aaggactaccactacgtggtgtttggagcgcctggcgcctacaactggaaaggcattgta
cgtgtagagcaaaagaacaacactttgttggaaaagggattttatgatgatgggccttat
gaagttggagatgagaaccgcttggatcctgacctggtgcctgtgcctgctaacagctac
ctaggattttcccttgattctggctttagcatcaccaaggggcgtggcctaactattgtg
tctggggcaccacgagccaatcactctggggctgtggtcctgttgcgaaaagagaatgaa
gcgtcagcaagactctccccagagtacattctagaagggcctggactggcatcgtctttt
ggatatgatgtagctgtggtcgacctgaatggagatgggtggcaggatattgttgtggga
gcccctcagttcttcatgaaagagggagacattggaggagctgtttatgtctacatcaac
caggcaggaaagtgggccaagatcaccccaatccgcctcaatggaaccaaagactcaatg
tttgggctggcagtggagaacatcggtgacatcaatcaggactcctatcaagacatcgcc
gttggagcgccctacgctgacgctggtgcaggaaaagtgtacatttaccatggttctgct
aatggaatcaacaccatgcctgcacagatccttgagggaaagcccaacaacatcagatta
tttggatattctctggctgggaacatggatttagataagaattcctatcctgatatagcc
attgggtcgctctcagatacagttctcgtttacagggcaaggccaattattagtatcaag
aaggatgtcaaaattactccgaaggaaattgacttcacaaagaaaacctgtggcaacagt
atctgtttgaccgtggaagcatgcttcacctataaagcaaaccctgcatcatacagccca
aaactaactatccgctatgcatttgaggctgaagcagatcgcaggaagcaagggctgatc
tctagggtcctgtttctgaacaagtctcgcaccgaccaggacttccagtccaccggaaat
ctggacctccggggacaaaacaaaagagcgtgtaccaagacaaaaatcagactgcaggat
aacattagggacaagctgcgtggtattcccattgaggtgtcagtggagatcctgggcacc
aagcgtcagaagaggcagaacgctctcccccagcttgtgcctattcttgacaactcccag
ccaagcaaggtcgtcactgaggtgaacttcttaaaggagggatgtggaaatgataatatt
tgccagagtaacttacaactggagtacagattctgctccaaagagcccaaccaagaggta
ttccctccattacagatgcagaatgggctaccagtgatctccctcagtgatcagaaggac
atagctctggaggtgacagtgaggaacagaaatggggatgatgcccatgaggctaagctg
gtggggatgttccctaacgctctctcattctccggctttcgctctcagaaaactacgagg
gacaaaccggtgctttgtttagccaatcagaatggctcccagacagagtgtgaactgggg
aatccattcaaaacagattcagaggttactttctacataatcttgagcactgctggtatc
tctctcaataccacagaaatcgacattgaccttgagcttcaaacgaccagtacacaggaa
aaaacgggcagtgtgaaagcaagggcaaaagtagtgattgagatgttactttctgttgca
ggaattgcgagaccctcccaggtgtattttgggggcgatgtgaaaggagagagtgccatc
aagacagaagaggagattggcagtttgatcgattatgaatttaggataatcaatttgggt
aagccgttgaagtcctttggcacagccacgctgaacgtccagtggcccaaagagaatgtg
gatgggaagtggctgttatatctggttaagatcagcaccactggccttgaagagatcccc
tgctccccagagactgagatcaactctctcaaacacgttcaggagtctagcacatctagg
aaaaagcgtgaagctggaggcaaaaaatctggaggcaaaatctctttatcagaccaaaga
aagcacaagattttgatgtgtggcaatggctacgacgctagatgtgtggtgatcaagtgc
cctctactgggcttggacagtagtgcagtgatttctctaaggtcccgtctgtggaacgcg
accttccttgagaattacgcgtctttgaactatcttgatataattgtgaaagcttccatc
agccttgatgcacctgcaaagaatatggttctcaggaatgctgagactcaggtgagagtc
acagtgtttccagagaaggcggtagcccagtttggtggagtcccatggtggatcatcctt
gtggctgtcctggctggtattctgatgttggcgttgctagtgtttctactctggaagtgt
ggatttttcaaacgctcaaaacatgatgacagcgttccaagataccatgccgtacggata
aagaaggaggcttgtcagtttaaagacggaaaagccaagatggattcctttgagaaaaag
cagtggatgacaagctggaatgagaacgagagctactcatga
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integrated database retrieval system