Salmo trutta (river trout): 115160815
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Entry
115160815 CDS
T08542
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115160815
Transcription factors [BR:
stru03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115160815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
VirB4_TrbE_N
Motif
Other DBs
NCBI-GeneID:
115160815
NCBI-ProteinID:
XP_029567130
LinkDB
All DBs
Position
24:16344416..16346985
Genome browser
AA seq
243 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFAFPVPYNLGEHDALKVSGLSHGALHESL
LGNPDKAAAAAAAAAARVFFNPSMTTNPYSFFDLGSKMSELSSPSFPYPSLGYPGGTAFS
GTGSVGGTHTHTHSHPAPGNPGYMIPCNCTGWPSAGLQPPLAYILLPGMGKPQLDYPAYA
AAL
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtaaaacgcccgatgaatgccttcatggtttggtccaga
gcgcagagaagaaaaatggctcaggagaacccaaaaatgcacaactccgagatcagcaaa
agattgggagcggagtggaaacttctcaccgagtcagagaaaaggccattcattgacgaa
gctaaacgactgagagccatgcacatgaaggaacaccctgactataaatacagacctagg
cggaagccaaagactctgatgaaaaaagacaagtttgccttcccagtgccctacaatctt
ggagagcacgacgcgcttaaagttagcggtctatctcatggagcacttcacgagtcccta
ttagggaacccagacaaggcagcagcggcagcggcggccgcagcagcgagagtcttcttc
aacccgtccatgaccacgaacccctattcattttttgacctcgggtcgaagatgtcagag
ctttcctctccatcgtttccttacccatctctggggtaccctggtggcacggctttctct
ggaactggtagtgttggtggaacacacactcacactcactctcatccagccccgggcaac
ccaggctacatgatcccctgtaactgtacgggctggccctctgcgggtctccagccaccg
ctagcctacatcctgctgcctggcatgggcaaacctcaacttgactaccctgcatatgca
gcggcattatga
DBGET
integrated database retrieval system
