Salmo trutta (river trout): 115160828
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Entry
115160828 CDS
T08542
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115160828
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115160828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
bHLH_HIF1A
bHLH_NPAS4
PAS_4
PAS_9
Motif
Other DBs
NCBI-GeneID:
115160828
NCBI-ProteinID:
XP_029567152
Ensembl:
ENSSTUG00000050863
LinkDB
All DBs
Position
24:complement(16765732..16822967)
Genome browser
AA seq
1015 aa
AA seq
DB search
MYAGRKRRKPVQRAVKQPPSEGAKSNPSKRHRDRLNGELERLASLLPFPEEVTTSLDKLS
ILRLSVSYLRAKNFFTVALKNCTCNGELANGGSDDNGKATGLADSWLPEGELLLQALNGF
ILVVTNDGTIFYSSHTIQDYLGFHQTDVMHQSVYELVHTEDQQELRSNLHWALNPPDIVA
PVTPLGETPSDAEPDSSTTATVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALSL
QGRLKFLHGQNQRQDNGGKAPPQLALFAIATPLQPPSILEIRTKNMIFRTKHKLDFTPMA
CDAKGKIVLGYTEAELRVRGSGYQFIHAADMLYCAENHVRMMKTGESGLTVFRLLTKDNC
WKWVQANARLVYKNGKPDYIIATQRPLMEEEGGEHLCKRSMHLPFTFATGEALLYQSNHP
IARFNDGAQGSENSVSKSKKGRTDRVSRDGLDPGSLLGVLMSQDKSVYVCQPALEPKLSF
HSSLFGDRVGLSDSDPTALLQGWDESSNGVVGPGLPEPASSFDPLLVTLDSLSLEGQGGV
VDGEGDRGNGEACSNGELFGALEGLGLSAEDLELLLLDERMIQVEMDPERVPTLDDLLTN
DEILSYIHDSLEAKTDAAEDGGQVPSTRPATTAPITTTTTKKAPVESNPTSATNVHSQYL
PHKSPVVGQAPIVQLSQKMQQYLSMRPGMAVQDWAQHNNQMPHPVVHGLQGQSQPIHNGQ
WTSQHILASTGVPVDHCHTPQSLFNGKASEPDGDLHRRQADQHQHYLQQHQQQDMVPSQL
PLCHAKQPDANLNGVYGIPNTHTEHHPAGKQQWQDYSYSQLGETTLNSNPCLSNGHIPPV
THTTVDACMDFTMADNPGMDYIINECSYGGNEEHQGTEAAISSYQRMNHKQQQEQLQQEQ
LQQEQLQQEQLPPPLAQVLSSLSQCPPPNATLEQILGVEQSYRQLPSLEAYGMVTSDIPH
NSNHSKMENGCIFNGTYSGGCVLPNGNGVVPSVSQLPCPDTLSSLPDAQSSGFYL
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctggacgtaaaaggagaaaaccagtccagagagcggtgaaacagcccccatca
gaaggggccaagtcgaacccctccaagcgccaccgggaccgtctaaatggagagctggag
aggctggccagcctcctgcccttcccagaggaggtcaccaccagcctggacaaactctcc
atcctccgcctaagtgtcagctacctccgggccaagaacttcttcactgtagccctgaag
aactgtacatgcaacggagagctggccaatggtggtagcgatgacaacggcaaagccacg
ggattggccgatagttggctgcctgaaggcgaactcttgctgcaggctctgaacggcttc
atcctggtggtcactaatgatgggaccattttttactcctctcacaccatccaggattac
ctgggcttccaccagactgatgttatgcaccagagtgtgtatgagttggttcatactgag
gaccagcaggagctgaggagtaacctccactgggccctcaacccacctgacatcgtggcc
cctgtgaccccactgggagagaccccctcagatgcggagccggacagcagcactactgcc
actgtgacctataaccctgagcagctccccccagagaactcctccttcctggagaggaac
tttgtgtgtcgcttccgctgcctcctggacaattcctctggcttcctggccctaagtctg
cagggcaggctgaagttcctgcatggtcagaaccagcgccaggataacgggggcaaggcg
cccccccagctggccctgtttgccatcgctacgcccctccaacccccctccatcctggag
atcaggaccaagaacatgatcttcagaaccaaacacaagctggacttcacccccatggca
tgtgacgcaaaggggaaaattgtgcttgggtatactgaagctgaacttcgggtgcgaggt
tccggctatcagtttatccatgcagcggatatgttgtactgcgctgagaaccatgtccga
atgatgaagacaggagagagcggtctgaccgtgttcagactcctcaccaaggacaactgc
tggaagtgggtccaggccaacgccaggctggtctacaagaacggcaaaccagactacatc
atcgccacgcagaggcctctgatggaggaggaaggaggcgagcacctgtgtaaacgatcc
atgcacctccccttcaccttcgcgacgggagaggccctgctctaccagtctaaccaccca
attgcacgcttcaacgacggtgcccagggctctgagaatagcgtcagcaagtccaagaag
ggacggactgacagggtctccagggatggcctggacccaggctccctcttgggggtgctg
atgagtcaggataagtctgtgtacgtctgccagccagccctggagcccaagctgtccttc
cacagcagtctgtttggggaccgggtcggcctctctgactccgaccccactgctttgctc
cagggctgggatgagtcatccaatggtgtagtgggtccgggtcttccagagccggcgtca
agctttgatccactgctggtgaccctagactccctgtccctggagggtcaggggggtgtg
gtggacggggaaggggacagaggcaacggggaggcctgttccaatggggagctttttggg
gctctagagggcctggggctgagcgccgaggacctggagctgctgctgctggacgaaagg
atgatccaggtggagatggaccctgagcgggttcctaccctagatgacctgctgaccaac
gacgaaatcctctcctacatccacgactccctggaggcaaagacagacgcggcagaggac
gggggccaggtgccctccactcgcccagctacaactgccccaataacgacgacaacaaca
aaaaaggcacctgttgaaagtaatcccacttctgccaccaatgtgcactctcaatacctt
ccccataagtctcccgtagtggggcaggcacccatagttcagctctcccagaagatgcag
cagtacctcagcatgcggccagggatggcggtccaagactgggcccagcataacaaccaa
atgccccatcccgtggtgcatggactccaggggcagagtcagcccatacacaatggacaa
tggacatcccagcacattctagccagtacaggggtcccggttgaccactgtcacaccccc
cagtctctgttcaatggaaaggcgtcagagccggatggggatcttcaccggcggcaagcc
gaccagcaccaacactacctccagcagcatcaacagcaggacatggtcccgagccagctc
cctctgtgccatgccaaacagccggacgccaatctcaacggagtgtatggcattccaaac
acacacacagagcatcacccagctggtaaacagcagtggcaggattacagctacagccaa
cttggggaaaccaccctgaacagcaacccctgcctcagcaatggccacataccccccgtc
acacacaccaccgtagacgcttgtatggatttcactatggctgataatcccggcatggat
tatatcatcaacgaatgctcgtatggggggaacgaggagcaccaggggacagaggccgcc
atttcatcctaccagaggatgaaccacaagcagcagcaggagcagctgcagcaggagcag
ctgcagcaggagcagctgcagcaggagcagctgccccctcccttggctcaggtgctgtcc
agcctctcgcagtgccctccgccaaacgctaccctggagcagatcctgggggttgaacag
tcctacagacagctgccctcactggaggcctatggcatggtgacctctgacatccctcac
aactccaaccacagtaagatggaaaatggctgcatttttaacgggacctactcaggaggc
tgtgttctgcccaatgggaatggtgtggtgccctctgtcagccagctcccctgccctgac
actttatccagcctccctgatgcccagtcctcaggcttttacctctga
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