Salmo trutta (river trout): 115160829
Help
Entry
115160829 CDS
T08542
Name
(RefSeq) aryl hydrocarbon receptor
KO
K09093
aryl hydrocarbon receptor
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115160829
Transcription factors [BR:
stru03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115160829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
HLH
bHLH_NPAS4
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
115160829
NCBI-ProteinID:
XP_029567154
UniProt:
A0A674F4S0
LinkDB
All DBs
Position
24:complement(16833089..16882132)
Genome browser
AA seq
1058 aa
AA seq
DB search
MLSNAGVYAVKKRKKPVQKTKKTPAPEVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVCS
RLDKLSVLRLSVGYLKVKSFFKATMKKSSVLFPSGNGLNINGMEATTFSKGDLLLQALNG
FVLVVTAEGHVFYASPTIQDYLGFHQSDVVHQSVFELIHTDDRAMFRRQLHFALKPKPFD
PEQGGDGMASSSDITRNIVTYNPEQLPPENSSFLERNFVCRFRCLLDNSSGFLALNFQGR
LKFLHAQSMLGDDGTRSQPNLGLFTIATAVQNPSILEIRTKTIFFQTKHKLDFTPMGVDA
RGKVVLGYSEMELCMRGSGYQFIHAADMMYCADNHVRMIKTGESGLTTFRLLQKTGCWVW
VQANARLIYKGGRPDFIIARQRALLNSEGEEHLRQRKMQLPFSFTTGEALLYETGPTLDA
TEFQTNSPKIRKVESLDPQSLLGSLLTQDESVYTQPQEPQLPIDQAFMDSRALTNVACNS
WQSSMEPQGPDGDDDGDGPSEVKQKGAVVAMIDALQKMARDGDLCEALQGLDVDAAELME
WESALLRLSQESNGTGGGNTSPELDDIMTNDIFSYVEEALFKESSQGSSNQPNCSIMVNN
NPNLNLFTEMFNNNNQDGPFTGMVSPTGVGQCKPGLLDSRSFIHNCSPVNGQIGQVTGNG
PDGLAGQNQAGPHQVFNSTQRLSHFGPQIPQMDLNIPTLQQLQLNDIFTPSLELPELSIP
HSSGQNGAVTFGTNMAGSCAQGPNNHMGSPPGITGRVHSNQSPPQFFTHNGVPATMAPNG
PQQISVPQSNHVAPSLVDGWASMIPSNAFVSPQIESSNLNLSNPLPTACLQGNSAPFQSL
KIQRVQQWPQNQQQLPPPASTIQNGIMPNGHKLIPDCHSQATETQRVPLTGLWPQNPNRL
YHRTQQGGLANGQPAPSSSCMFENISPPLPNGNSHVDGTRLAPTLSVCQSRMVDPQDQSP
PRGSCYFQWDPSEPVVGTSAVIQDNASTSPLSRPLVAKITTPEGLLAMQQYLAGCSGVGQ
TQIPSLPVIDSNGIFSLPPLVNGSMCFTEHNQTNYSNF
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacgctggagtctatgctgtcaaaaagcggaagaagcccgttcagaaaacc
aagaaaacccctgctccagaagtggtcaagtcgaacccttccaaacgccaccgggatcgg
ctgaacggggagctggacaggctgacaggccttctaccattccctgaggatgtgtgctct
cgcctggacaaactctccgtgctccgcctcagcgttgggtacctgaaggtcaagagcttc
ttcaaagcgaccatgaagaaaagcagtgtcctgtttcccagtgggaatgggctgaacatt
aatgggatggaagccacaaccttctccaagggggacctactactccaggctctgaatggc
tttgtgctggtggtcacagctgaaggacatgtgttctatgcctctcctactatccaagac
tacctgggcttccatcagtcagatgtggtccaccagagtgtgtttgagctgatccacaca
gacgacagagcaatgttcagacgacagcttcactttgccctcaaacccaagccctttgac
ccagagcagggaggagacggcatggcaagcagcagtgacatcaccaggaacattgtgacc
tataaccctgagcagctccccccagagaactcctccttcctggagaggaactttgtgtgt
cgcttccgctgcctcctggacaactcttctggcttcctggctctgaacttccaggggcgt
ctcaagttcctccatgcccagagcatgctgggggatgacgggacacgcagccagcccaac
ctgggtcttttcaccatcgccaccgctgtccagaacccgtccattttggagatcagaacg
aagacaatcttcttccagaccaaacacaagctcgacttcacccccatgggtgttgatgcc
agggggaaggttgtcctgggctactcagagatggagttgtgtatgagaggctctggttat
cagttcatccatgcagctgatatgatgtactgcgcagacaaccatgtcagaatgattaag
acaggagagagtggtctgacaacattcagactacttcagaagaccgggtgctgggtctgg
gtccaggccaatgccaggctcatctacaaaggaggaaggcctgacttcatcatcgcacgc
cagagagctttgcttaattccgagggagaggagcatttacgccagaggaagatgcagctg
ccattcagcttcaccaccggggaggccctgctgtacgagaccggccccactctggatgcc
actgaattccaaaccaactccccaaaaatccgcaaggtggagtccctggacccccagtct
ctgctgggctccttactgacgcaggacgagtccgtctacacccagccccaggagcctcag
ctacccatagaccaggcattcatggacagccgagcgctcaccaatgtggcctgtaactcc
tggcagagtagcatggagccccaggggcccgacggggatgatgatggtgacggccccagt
gaggtgaagcagaagggggcggtggtggccatgatagacgccctgcagaagatggcacga
gatggggacctgtgtgaggcgctgcaggggctggacgtggacgcggccgagctgatggaa
tgggagagtgccctcctcaggctgagccaggaatccaacgggactggtggcgggaatacc
tccccggagctggatgacatcatgacaaacgacatcttctcttacgtggaggaagccttg
ttcaaggagagcagccaggggagcagtaaccagcccaactgttccattatggtcaacaac
aaccctaacctaaacctgttcacagagatgtttaacaacaacaaccaggatggaccattc
acaggaatggtcagccctacaggtgtcggacagtgcaagcccgggttgcttgacagtcgc
agctttatccataattgctccccagtgaacggtcaaattggtcaggtaacaggcaatgga
ccagatggtttggcaggacagaaccaggcaggaccacaccaggtgttcaacagcacccag
aggctctcccactttggcccccagatccctcagatggacctgaacatccccaccctgcag
cagctacagctcaacgacatcttcaccccctctctggagctccccgagctcagtatccca
cacagctcaggccagaacggggctgttacgtttggcaccaacatggctggatcctgtgct
cagggaccaaacaaccacatgggaagccctccgggtatcactggccgggtccactctaac
cagtcacctccacagtttttcactcataatggcgtgccagctacaatggcaccaaacgga
ccacagcagatctctgttccacagtccaaccatgtagcacctagtctggtggatggctgg
gcatccatgattcccagtaatgcctttgtttcaccccagattgaatctagcaatctcaat
ctatctaatccccttccgactgcttgccttcagggaaacagtgcaccatttcagtcactc
aaaatccagagagttcagcagtggccccagaaccagcagcagctgccacccccagccagc
accatacagaatggaataatgccaaatggacacaaattaatccctgactgtcacagtcaa
gccacagagacacaaagggtccctctcacaggcctttggccacagaaccccaacagactg
taccaccgaacccagcaggggggattggccaatggccagcctgctccatccagtagctgc
atgtttgagaacatctcaccccccctccctaatggaaacagccacgtggatggcaccagg
ctggcccccacattgtctgtatgccagagtaggatggtggacccccaggaccagagtcct
ccacggggctcttgctacttccagtgggaccccagtgagccggtggtgggcacgtcagcc
gtcatccaggacaacgccagcaccagccccctgtctcgccctctggtggccaaaataacc
acccctgagggcctactggccatgcagcagtacctggctggatgcagcggagtcggacag
acacagattccaagcctccctgttatagacagcaatggaatattctctttaccacccctt
gtaaatggatccatgtgctttacagagcacaaccaaaccaactatagcaacttctaa
DBGET
integrated database retrieval system
