Salmo trutta (river trout): 115160904
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Entry
115160904 CDS
T08542
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115160904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115160904
03110 Chaperones and folding catalysts [BR:
stru03110
]
115160904
03029 Mitochondrial biogenesis [BR:
stru03029
]
115160904
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115160904
Enzymes [BR:
stru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
115160904
Messenger RNA biogenesis [BR:
stru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
115160904
Chaperones and folding catalysts [BR:
stru03110
]
Heat shock proteins
HSP60 / Chaperonin
115160904
Mitochondrial biogenesis [BR:
stru03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
115160904
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115160904
Exosomal proteins of other body fluids (saliva and urine)
115160904
Exosomal proteins of breast cancer cells
115160904
Exosomal proteins of colorectal cancer cells
115160904
Exosomal proteins of bladder cancer cells
115160904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
Motif
Other DBs
NCBI-GeneID:
115160904
NCBI-ProteinID:
XP_029567280
Ensembl:
ENSSTUG00000011643
LinkDB
All DBs
Position
24:21125983..21134315
Genome browser
AA seq
577 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINNDQKIGIDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGGMGGGMF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgaggcagatgaggccagtcagcagggccctggccccc
cacctcacccgggcttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgccgtcaccatgggacccaagggtcgc
acagtcatcatcgagcagagctggggcagccccaaggtgaccaaggacggtgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggctaacaacacgaacgaggaagcgggagatggcaccaccactgccactgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaacgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatctctgctaatggagacgtg
gagatcggcaccatcatctccaacgccatgaagaaagtgggccgcaagggagtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctagtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgttgccacc
gggggcactgtatttggtgatgaggcggtgggcattgccctggaggacatccaggcccat
gactttggtaaggttggtgaggtgtctgtcaccaaggatgacaccatgctgctgaagggg
aagggagacactgcggccatcgagaagcgccaggcagagatcgttgagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaacgagaagaaggatcgt
gtgacagacgccctgaatgccaccagggccgctgtggaggagggcatcgtgcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacaatgac
cagaagattggaattgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggctacgatgccatggagggagagtacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgttgcttctctgctctcc
accgcagagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggtggcatggggggtggcatgggaggtggcatgttctaa
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