Salmo trutta (river trout): 115160928
Help
Entry
115160928 CDS
T08542
Name
(RefSeq) integrin beta-5-like
KO
K06588
integrin beta 5
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04148
Efferocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115160928
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115160928
04148 Efferocytosis
115160928
09144 Cellular community - eukaryotes
04510 Focal adhesion
115160928
09142 Cell motility
04820 Cytoskeleton in muscle cells
115160928
04810 Regulation of actin cytoskeleton
115160928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115160928
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115160928
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115160928
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115160928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
EGF_integrin
Integrin_b_cyt
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115160928
NCBI-ProteinID:
XP_029567321
Ensembl:
ENSSTUG00000021179
UniProt:
A0A673ZZN3
LinkDB
All DBs
Position
24:21677871..21750634
Genome browser
AA seq
804 aa
AA seq
DB search
MWSPWQLVYRTAFGCMVLEIFIHNVAQGLNVCMSGSATSCEECLLISPSCAWCAQEEFGR
ARTLTSRCDLSQNLQKRGCEAHNIESPSSTTMVVKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTATKYQDNPCNGYKLFPNCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTKMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFTVSVDARGCPAPGTQQRFTIKPVGFKDRLEVSVDYRCDCGCTDWTQANSSR
CSSIGQYTCGTCRCDPGYLGARCECQEGEAGSMYLSACREAEGKQICGGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGKICSGRGSCACGHCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFDSGRLSDN
QTCQRLCKDEIITVETLKTEDPNAVLCLYKTENECVMKFMYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARCRARYEMASNPLYK
QPISSHPIETDFIMYGKSYNGAAH
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccatggcagttggtgtaccgtacagcctttggctgcatggttctggaaata
tttattcacaatgttgcacaaggactcaatgtttgtatgagtggcagcgctacatcctgt
gaagaatgcctcctcatctctccgagctgcgcctggtgcgcgcaagaggagtttggcagg
gcgaggaccctgacgtcgcggtgtgacctgagtcagaacctgcagaagagaggctgtgag
gcccataacatagagagtcctagtagcacaaccatggtagtgaagagcgaacctctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctgagtcttagaccaggtgaccagacgtcattcgaagtgcaggtgcgtcaggtggaggac
taccctgttgacctgtactacctgatggacctgtctctgtccatgaaggatgacctggac
accatcaggaacctgggcaccaagctggctgacgagatgaggaaactcacctcaaacttc
agactgggctttggctccttcgtagacaagaacatgtcaccattctcttacacggccacc
aagtaccaggacaacccctgcaatggatacaagctgttccccaactgtgtcccttccttc
gggttccgccacctcctctccctgactgacaaggtggatcgcttcaacgaggaggtgcag
aaacagatggtgtctcgcaacagggacgctccggagggaggcttcgacgccatcctgcaa
gctgccgtctgtaaggagaggataggttggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaaactgggaggcctggtccagccc
catgatggggagtgccacatgaatgagaagaacgaatacagcggctccaccaagatggac
tatccctctctggctctattgggagagaagctggcggagaacaacatctatctcatcttc
gctgtgactaaaaggctctatgtcatttacaagaattttacagcactgatacctggaact
acagtggaaattctggatcaggactccaagaacatcatccaactcatcgttaatgcctac
aataacatccggtccaaagtggagctgactgtgtgggatcaacctgaagacctcagtctg
tccttcacggccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgac
ctcaagatcggagacacggtgtccttcaccgtgagtgtggacgctaggggctgccccgcc
cctggcacccagcagagattcaccatcaaacctgtgggcttcaaggatcgtctggaggtg
tcagtggactaccgctgtgactgtggctgcaccgactggacccaggctaacagtagccgc
tgcagctccatcggacagtacacctgtggtacctgccgctgtgacccgggctacctgggc
gcccgctgtgagtgccaggagggcgaggctggcagcatgtacctgagcgcctgtagagag
gcggaggggaagcagatctgtggtgggcgaggggagtgtagctgtaaccagtgcctctgc
tacgagtcagagttcgggaagatctacgggaccttctgcgagtgtgatgacttctcctgc
gcccgacacaagggcatcctctgctcaggtcacggagagtgccactgtggggagtgtaag
tgccatgcgggctacatcggagacaactgtaactgttccacggacacgtcttcctgtgtg
tctgatgacgggaagatctgtagtgggcgaggcagctgtgcgtgcggccactgccagtgt
acagaaccaggggccttcggggacacctgtgagaaatgccccacctgccctgatgcctgt
ggcaccaaaagggaatgcatcgagtgccggcttttcgactccggaagactctccgacaac
cagacctgccagcggctatgcaaggacgagatcatcactgtggaaacgcttaaaacggaa
gacccaaacgctgtcctttgcttgtacaagacggagaacgagtgtgtgatgaagttcatg
tactctgaacacgccaacggcatgtcagtcctcaccgcgctcaaagagccagagtgtggc
gcagcgccagatgccatgactgtcctcctggcggtggtgggcagtatcctgctggtgggc
attgtgctgctagccatctggaagctggtcatcaccgtgcacgaccggcgggagtttgcc
cgcttccagagcgcacgctgccgcgcacgttacgagatggcctccaaccccctctacaag
cagcccatctccagccacccaatagagacagacttcattatgtatggcaagtcttacaac
ggagcagcccactga
DBGET
integrated database retrieval system