KEGG   Salmo trutta (river trout): 115160928
Entry
115160928         CDS       T08542                                 
Name
(RefSeq) integrin beta-5-like
  KO
K06588  integrin beta 5
Organism
stru  Salmo trutta (river trout)
Pathway
stru04145  Phagosome
stru04148  Efferocytosis
stru04510  Focal adhesion
stru04512  ECM-receptor interaction
stru04810  Regulation of actin cytoskeleton
stru04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115160928
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115160928
   04148 Efferocytosis
    115160928
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115160928
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115160928
   04810 Regulation of actin cytoskeleton
    115160928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115160928
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115160928
Membrane trafficking [BR:stru04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    115160928
Cell adhesion molecules [BR:stru04515]
 Integrins
  Integrin beta subunits
   115160928
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin EGF_integrin Integrin_b_cyt I-EGF_1 EGF_2 EGF_Teneurin vWA_SIBA-E
Other DBs
NCBI-GeneID: 115160928
NCBI-ProteinID: XP_029567321
Ensembl: ENSSTUG00000021179
UniProt: A0A673ZZN3
LinkDB
Position
24:21677871..21750634
AA seq 804 aa
MWSPWQLVYRTAFGCMVLEIFIHNVAQGLNVCMSGSATSCEECLLISPSCAWCAQEEFGR
ARTLTSRCDLSQNLQKRGCEAHNIESPSSTTMVVKSEPLSSKGSGPTQYDVIQIMPQKIS
LSLRPGDQTSFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMRKLTSNF
RLGFGSFVDKNMSPFSYTATKYQDNPCNGYKLFPNCVPSFGFRHLLSLTDKVDRFNEEVQ
KQMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQP
HDGECHMNEKNEYSGSTKMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGT
TVEILDQDSKNIIQLIVNAYNNIRSKVELTVWDQPEDLSLSFTATCQDGQPLPGLRKCAD
LKIGDTVSFTVSVDARGCPAPGTQQRFTIKPVGFKDRLEVSVDYRCDCGCTDWTQANSSR
CSSIGQYTCGTCRCDPGYLGARCECQEGEAGSMYLSACREAEGKQICGGRGECSCNQCLC
YESEFGKIYGTFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTDTSSCV
SDDGKICSGRGSCACGHCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFDSGRLSDN
QTCQRLCKDEIITVETLKTEDPNAVLCLYKTENECVMKFMYSEHANGMSVLTALKEPECG
AAPDAMTVLLAVVGSILLVGIVLLAIWKLVITVHDRREFARFQSARCRARYEMASNPLYK
QPISSHPIETDFIMYGKSYNGAAH
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgtggagcccatggcagttggtgtaccgtacagcctttggctgcatggttctggaaata
tttattcacaatgttgcacaaggactcaatgtttgtatgagtggcagcgctacatcctgt
gaagaatgcctcctcatctctccgagctgcgcctggtgcgcgcaagaggagtttggcagg
gcgaggaccctgacgtcgcggtgtgacctgagtcagaacctgcagaagagaggctgtgag
gcccataacatagagagtcctagtagcacaaccatggtagtgaagagcgaacctctcagc
tccaaaggctccgggcctacccagtatgatgtcatccagatcatgccccagaagatctcc
ctgagtcttagaccaggtgaccagacgtcattcgaagtgcaggtgcgtcaggtggaggac
taccctgttgacctgtactacctgatggacctgtctctgtccatgaaggatgacctggac
accatcaggaacctgggcaccaagctggctgacgagatgaggaaactcacctcaaacttc
agactgggctttggctccttcgtagacaagaacatgtcaccattctcttacacggccacc
aagtaccaggacaacccctgcaatggatacaagctgttccccaactgtgtcccttccttc
gggttccgccacctcctctccctgactgacaaggtggatcgcttcaacgaggaggtgcag
aaacagatggtgtctcgcaacagggacgctccggagggaggcttcgacgccatcctgcaa
gctgccgtctgtaaggagaggataggttggaggaaggaggccttccacctgctggtgttt
gccacagacgatgtgcctcacctggccttggacggtaaactgggaggcctggtccagccc
catgatggggagtgccacatgaatgagaagaacgaatacagcggctccaccaagatggac
tatccctctctggctctattgggagagaagctggcggagaacaacatctatctcatcttc
gctgtgactaaaaggctctatgtcatttacaagaattttacagcactgatacctggaact
acagtggaaattctggatcaggactccaagaacatcatccaactcatcgttaatgcctac
aataacatccggtccaaagtggagctgactgtgtgggatcaacctgaagacctcagtctg
tccttcacggccacctgtcaggacggacagcctctcccaggcctcaggaagtgtgccgac
ctcaagatcggagacacggtgtccttcaccgtgagtgtggacgctaggggctgccccgcc
cctggcacccagcagagattcaccatcaaacctgtgggcttcaaggatcgtctggaggtg
tcagtggactaccgctgtgactgtggctgcaccgactggacccaggctaacagtagccgc
tgcagctccatcggacagtacacctgtggtacctgccgctgtgacccgggctacctgggc
gcccgctgtgagtgccaggagggcgaggctggcagcatgtacctgagcgcctgtagagag
gcggaggggaagcagatctgtggtgggcgaggggagtgtagctgtaaccagtgcctctgc
tacgagtcagagttcgggaagatctacgggaccttctgcgagtgtgatgacttctcctgc
gcccgacacaagggcatcctctgctcaggtcacggagagtgccactgtggggagtgtaag
tgccatgcgggctacatcggagacaactgtaactgttccacggacacgtcttcctgtgtg
tctgatgacgggaagatctgtagtgggcgaggcagctgtgcgtgcggccactgccagtgt
acagaaccaggggccttcggggacacctgtgagaaatgccccacctgccctgatgcctgt
ggcaccaaaagggaatgcatcgagtgccggcttttcgactccggaagactctccgacaac
cagacctgccagcggctatgcaaggacgagatcatcactgtggaaacgcttaaaacggaa
gacccaaacgctgtcctttgcttgtacaagacggagaacgagtgtgtgatgaagttcatg
tactctgaacacgccaacggcatgtcagtcctcaccgcgctcaaagagccagagtgtggc
gcagcgccagatgccatgactgtcctcctggcggtggtgggcagtatcctgctggtgggc
attgtgctgctagccatctggaagctggtcatcaccgtgcacgaccggcgggagtttgcc
cgcttccagagcgcacgctgccgcgcacgttacgagatggcctccaaccccctctacaag
cagcccatctccagccacccaatagagacagacttcattatgtatggcaagtcttacaac
ggagcagcccactga

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