Salmo trutta (river trout): 115160957
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Entry
115160957 CDS
T08542
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stru03036
]
115160957
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115160957
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
115160957
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
115160957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
HEAT_DAAF5
Cnd1
Sec7-like_HUS
Dopey_N
ParcG
TAN
MMS19_C
DUF2726
Motif
Other DBs
NCBI-GeneID:
115160957
NCBI-ProteinID:
XP_029567384
Ensembl:
ENSSTUG00000030032
LinkDB
All DBs
Position
24:22857229..22952026
Genome browser
AA seq
1663 aa
AA seq
DB search
MEVNMEYCLAQVVQKDLGRKVQVGQELIDYIVDKEKSQDLEQDQTALDRMVDGIATTWVN
SSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLASLIDRLGDSKDQVRDQDQILLLKIME
QTASPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSASSSKAPPSGRRAVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNRDMEDNLSKVREVLSDDKNDWEHRVVALKKVRSLLLAGALEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLLGNKFDHCAETLMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAVLTETIKKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSAIGGSMTRGKMVSSRVNSNAGGSLQRSRS
DIDVNAAASAKSRLVTVPSASPFSSAAALPPGSYASLDGTPGKIDTGRVRTRRTSSGNAV
GANATVTDSRGRSRAKMMSQSQRSRSANPTGGGKARTSSNQTGSRSSSPGKLLGHSSGYG
RISRPPATSSTPADKRSKVPRSQGCSRDSSPNRLGLARLCGKALVPGTPLSSYDTLARSR
IPRPSMSQGCSRDTSRESSRDTSPARGFKPLASRRTSRSTSALSTADPHSQSDRFGLIHQ
ARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIYSDDDANSDASS
ACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVE
LKRLCEIFTRMFADPHSKRVFSMFLETLVDFVLVHREDLQDWLFVLLTQLLKKMGADLLG
SVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLGRQMDPTD
FVNSSETRLAVSRIITWTTEPKSSDVRKTLHNWVVEELSGRSGTAALLSQQAGEGHLEER
CKQAAQVVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTNSVSSPSNTIG
RTPPRHTPSRTSPLTSPTNCSHGGLSPSRLWGGCWSGDGLSKHPPPPHPPPPPSTPSGPA
LRVLRRAYSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYRSQEDLNEPRGKRDDAVGR
EGVASSPGSDARLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDTITSS
YDKSALKEAVFDDDVEQFRDCRRQDGSGENKMLPPKGFVPGSQDHSDLVADLLKELSNHN
ERVDERKGALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILR
NQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTAD
YPINLAAIKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVI
GEELKPHLQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaatatggagtattgtctggcccaggtggtgcagaaagacctggggcggaag
gtacaggtgggacaggagctcatagattacatcgtggataaggagaagtcccaggacctg
gagcaagaccagacggctctggacaggatggtggacggcatcgctaccacctgggtcaac
tcctccaatttcaaggtggctttgctaggtatagaccttttatctgccttagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactggccagtctgatagatcgtctg
ggtgattccaaagaccaagtcagagaccaagatcaaatcctgctgctgaagatcatggag
cagactgcctccccacagtatgtttgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaactctcaacatgtacggagcc
caaggcctaaccctcagtaaaatagtccctcacatatgtaatcttctaggagatcccacc
agtcaggtgagagacgcagctatgggctgcctggtggagatctacagacacgtgggggag
agggtgaggatggaccttagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agccgatttgatgaagtccaaagatctgggaacatgatcccatcctcaggttcagataag
aactttgatgacgaggactctgtggacgggggccggtcctcctcctctgcatcgtcctcc
aaggcgccccccagtggtaggagggctgtagctgcggcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggtgctgttgatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagacatg
gaggacaacctctccaaggtccgggaggttctctctgacgacaaaaacgactgggagcac
agagtcgttgccctgaagaaggtacgttctctgctcctggctggagcgctggagtatgat
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcagctaaagacctc
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacgttgctgggc
aacaagtttgaccactgtgcagagaccctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggccacgtctggcatggcagccatacgtctcatcctcaggcacaca
cactactcacgtctcatccccatcatcactagtaactgcacgtccaaatcagtggccgtc
agaaggcgcagttatgagttcttagaactgttattactggagtggcagacacacacactg
gagaggcacgtggctgttctgactgaaaccatcaagaaagggatccatgatgctgactca
gaggccagatcggtcgcgagaaagtgttattggggtttccatggccactacagccgggag
gcggagcatctgttccaggccctggagtcaacctatcagaaggctctgcagtctcacctg
aagagttctgacagtgtcgtgtctctcccccaatcggaccgctcatcctcctcctcacag
gagagcctcaaccggcccctgtctgtcaagagtgccataggaggcagcatgacaaggggt
aagatggtgagttccagggtgaactccaacgccggcggttctcttcagcgttcccgtagt
gatatcgacgtgaacgccgcggccagcgccaagtcacgcctggtcaccgtgccctccgct
tctcccttcagctcagcagctgccctgcccccaggctcctacgcctcactagatggcaca
cctggtaaaattgatactggccgtgtgcgtacgaggagaacaagctccggcaatgccgtc
ggagccaacgctactgtgactgacagcagggggcgcagccgagccaaaatgatgtcccag
tcccagcgatccagatctgctaaccccactgggggtggtaaggcccgaacttcatccaat
cagactggcagccgctccagttcccctggcaagctgctgggccactcgtctgggtacggg
aggatcagcaggccccctgcaacctccagcacacctgcagacaagaggagcaaggtcccc
cgcagccagggctgtagtagagattcctcgcccaacagactgggcctagccaggctgtgt
ggtaaagctcttgttcctggtactcctctctcctcctacgacacgctagcaaggagccgt
atcccccggcccagcatgagtcagggctgcagcagggacacatctagggaaagcagccga
gacaccagccctgctcggggcttcaagcctcttgcctcccgacgtacctcccgctctacc
agcgccttatccacggctgacccccacagccagtcagaccgatttggtttgatccaccag
gcccgcatttctgcctcagtgaacgccatgagagtcctcaacactggcactgaggtggag
gctgctgtggctgacgcactgctattaggagactccagaaataagcggaagcctatgagg
cggcgctatgagtctcctggtatctattctgacgatgacgctaacagtgatgcgtccagc
gcctgctcggaacggtcgtacggctcccgaaacggaggtatccctcactacctgcgtcag
acagaggatgtggcagaggtactcaaccactgtgccagctccaactggtctgagaggaag
gagggactgctgggactgcagaacctgctcaagagtcaaagaatactcagccgggtggag
ctgaagagactctgtgaaatcttcaccaggatgttcgctgatccacacagcaagagagtg
ttcagtatgtttctagagactcttgtagactttgtcctggtgcacagagaggacctgcag
gactggctgttcgtcctgctcacccagctactgaagaagatgggagctgacctgctgggg
tctgtccaggccaaggtccagaaggctctggacatcaccagggagtcttttccgtttgat
cagcagtttaacatcctgatgaggttcattgtggatcagacacagacacccaacctcaag
gtgaaggtggccatcctgaagtacatagagtcactgggaagacagatggatcctacagac
tttgtcaactccagtgaaacgcgactggctgtatctcgcatcattacgtggaccacagaa
cccaagagctctgacgtcaggaagacccttcataactgggtggtggaggagctatcaggc
aggtccggtacggcagccttactgtcccagcaggccggggaggggcacctggaagagagg
tgtaagcaggcggcccaggtggtgctgatctctctgtttgagctgaacaccccagagttc
accatgctgctgggagccctgcccaagaccttccaagacggggccaccaagctgctccac
aaccacctcaagaactccagcaacaccaacagcgtgagttctcccagcaacactattggg
cggaccccaccccgccacacccccagccggaccagccccctcacctctccgaccaactgc
tcccatggtgggctgtctccgagtcggttgtggggtgggtgttggagtggtgatgggctg
tctaagcacccccctccccctcatcctcctccgcctccctccaccccctctggccccgcc
ctcagggtcctccgcagagcgtactctcccagtatgttggagtatgacacagagaacatg
aactctgatgagatctacagctccctgcgaggagtcacagaggccatccagagtttcagc
tatcgcagccaggaggacctcaacgaaccaagagggaagagggacgatgctgtggggcgt
gaaggtgtggcgtcctccccaggctctgatgcccgtttggggctagatgtggtggagggt
gggcgtacggccttggataacaagacctccctcctcaacactccgtctccccgctccttc
tccgggccgcgggccagggagttcgccccctacgggtatggggacaccatcacttcatcc
tacgacaagagtgccctaaaggaggccgtgttcgacgatgacgtggaacagttcagagac
tgccgtcggcaggacggcagtggtgaaaacaagatgttgccgcctaagggctttgttcct
ggttcccaggaccactcagaccttgtggcagaccttctgaaggagctgtccaatcacaac
gagcgtgtggatgagcgtaagggggccttggtggagctgctgaagatcacacgagaggac
agcctggccgtgtgggacgaacacttcaagaccatcctcctactgctcctggagacactg
ggggataaagaccacaccatccgggccctggctctgcgggtactgaaggagatcctgaga
aatcaaccggcccgcttcaagaactatgctgaactcaccatcatgaagaccctggaggca
cacaaagactcccacaaggaggtggtgcgggcagcggaggaggctgcctccaccctagcc
ggctccatccacccagagcagtgtatcaaggtgctgtgtcccatcgtccagacggctgac
taccccatcaacctggctgccatcaagatgcagaccaaggtgatagaacgcatcaccaag
gagtccctccaccagctgctgcctgatatcataccaggactactgcagggctatgacaac
acggagagtagtgttcgcaaggccagtgtgttctgtctggtggccatctactccgtgatt
ggagaagagctcaaaccacacctgcagctactcacgggcagcaagatgaagctgctgaac
ttgtacatcaagagggcccagacgaccaacagcaacagcagcagttcctcggatgtgtcc
tcacacagctag
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integrated database retrieval system
