Salmo trutta (river trout): 115160999
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Entry
115160999 CDS
T08542
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stru03041
]
115160999
Spliceosome [BR:
stru03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115160999
Complex C
U4/U6.U5 tri-SnRNP related factors
115160999
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Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
DUF7026
Motif
Other DBs
NCBI-GeneID:
115160999
NCBI-ProteinID:
XP_029567488
Ensembl:
ENSSTUG00000039264
LinkDB
All DBs
Position
24:complement(26784419..26841217)
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AA seq
1075 aa
AA seq
DB search
MVSTSSSESAKLAEEDREEMATKTNDNDLALELSSTSKEEHSRSSGMGQPRGSRSPSEEG
ERENDVAQQRSSMKATEGADSPAASPGPDGPRAASPSSEAPIVLGSPGVASSRATRGSRA
PSSVSQEEDESSGSDDGSSDEAVGCRMKSSVAQIMRGPDDQSANRGRSPTPDDISRSRSR
SRSRERDRRHGGGGYGRSREDDRNRDRYYERQSSRDREAEFRRRGRSPSPAQKDPAAEEP
PVKKKKEELDPILTRTGGAYIPPAKLRMMQAQITDKSSLAYQRMSWEALKKSINGLINKV
NVSNIAMIIQELLQENIVRGRGLLARSTLQAQSASATFTHVYAAVVAIINSKFPQIGELI
LKRLILNFRKGYRRNDKAQCLTASKFVAHLVNQNVAHEVLCLEMLTLLLERPTDDSVEVS
ISFLKECGLKLTEVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAIRKDGFKDHPIV
PEGLDLVEEEDQFTHMLPLEDDYNQEDILNVFKMDTDFLENEEKYKAIKKEILDEGSSDS
GEDADGSDDDEDDDDNDGEKEGEEGGEEAEKVTIFDQTEVNLVAFRRTIYLAIQSSLDFE
ECAHKLIKMAFPDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCLLKKDYMESFEAIFM
EQYETIHRLETNKLRNVARMFAHLLYTDSVPWSVLECIKVSEDTTTSSSRIFVKILFQEL
CAYMGLPRLNERLKDMTLQPFFEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNA
PKIIMTQNQEVESSDTDSSSDSSSSDSDSSDSDSSDSSSDSSSSSSSSDSDSRRKKSKGQ
SKNKKSDKDKKKDKMTKSKASSKNTSSNQKSPLEERPNKSLRNDNRRRDDSSSDEEAAER
GERRPELEDHHKSSRHRGREEDAPQPTYERPHRDRGGHQDEEQPRGRPDRGRDYEDSDRQ
TESRRHNRDDGGKYDGKRQAPQVDRADHDRVRHRSPEKEKEPARYRNRERSKSREKSSRK
EKDMDSSRNSYRNGVEQQAERANKENRENRHQSDRYREPRRNEERSRDSSPHRRR
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggtatccacgagttcatctgaatcagcaaaacttgcggaagaggacagggaggaaatg
gctacaaagacaaacgacaacgatttagcattggagttgagctctacttctaaagaagag
cattccaggtctagtggcatgggtcagccccgcgggagcaggagcccgtcagaggaagga
gaaagggagaacgatgtggcacagcagaggagcagcatgaaagctacagagggggcagat
agccctgcagccagtcctggacccgacggtcccagagcagccagccccagctcagaggcc
cccatagttctaggcagtccaggagtagccagctccagagccaccaggggtagtagggcc
ccatccagtgtcagccaggaggaagatgagtccagcggctctgacgatgggagcagtgat
gaggcagtaggctgcaggatgaagagcagtgtggcacagatcatgcgtggtccagatgac
cagagtgcgaacagaggcaggagccccaccccagatgacatttcccgctctaggtcccgt
tccagaagtcgggagagggaccggcgccacggtggaggaggttatggcaggtcaagggag
gatgatcgtaacagggaccgatactatgagcgccagtcgagtcgtgacagagaggctgag
ttcaggaggagaggccggtcgccctccccagcccagaaagaccctgctgcagaggaacca
ccagtgaagaagaagaaggaggaactggaccctatcctgaccaggactggtggagcttac
atccccccggccaaactgcgcatgatgcaggcccagatcactgacaagagcagtctggcg
taccagcgaatgagctgggaggctctgaagaagtccatcaacggtctgatcaacaaggtg
aatgtgtccaacatcgccatgatcattcaggaactgctgcaggagaacattgttaggggc
agaggtctcctggccaggtccaccctgcaggcccagagtgcttctgccaccttcacccac
gtctatgctgcagtggtagccatcatcaactctaagttccctcagataggagagctcatc
ctcaagagactcatccttaacttccgcaagggctaccggaggaacgacaaggcacaatgt
ctcacggcatcaaagtttgttgctcacctcgtcaatcagaatgtggcccatgaggtcttg
tgtctggagatgttgactctgctcctggagagacctacagacgacagcgtggaggtgtcc
atcagcttcctcaaggagtgtggcctcaaactcacggaggtttcccctaggggcatcaat
gccattttcgagcgactgcgcaacatccttcacgagtcagagattgacaagcgggtgcag
tacatgatcgaagtgatgtttgccatcaggaaggatgggtttaaggaccaccctatcgtc
ccagaggggctggacctggtggaggaagaagatcagttcacacacatgctgcccctagag
gacgactacaaccaagaagatatactcaatgtctttaagatggatacagacttcttggag
aacgaggagaagtacaaagcaattaaaaaggagatcctggatgagggcagcagcgactct
ggagaggatgccgatggaagtgatgatgatgaagatgatgatgataatgatggagaaaag
gagggggaagagggtggagaggaagcagagaaggtcaccatctttgaccagacggaagtc
aacctagtcgcatttcgccgtaccatctatctcgccatccagtcaagtttggactttgag
gagtgtgcccacaaattgatcaagatggcctttcctgacagccaaacgaaagagctgtgc
aatatgattctggactgctgtgcccaacagaggacctacgagaagttctttggtcttcta
gcagggaggttttgtctgctgaagaaggactacatggagagttttgaggccatcttcatg
gagcagtatgaaaccatccatcgcctagagaccaataaactgaggaacgttgctagaatg
ttcgcccatctcctgtacacagactcagtcccgtggagtgtgctggaatgtattaaagtc
agtgaggacaccaccacctcatccagtcgtatcttcgtcaagatcttgtttcaggagctc
tgtgcctatatgggacttcccaggctcaatgaacgactcaaggatatgacgctgcagccc
ttctttgagggtctctttcctcgtgacaaccccaggaacaccagattcgccattaatttc
ttcacctccatcggcctgggtggacttacggatgagctccgtgagcatctaaagaacgcc
cccaagattatcatgacccagaaccaggaagtggaatcgtctgacaccgactcgtcctct
gactcgtcctcctcagacagtgacagcagcgacagtgacagctctgactcctccagtgac
tcctcctcatccagcagcagctcagattctgactcgaggcgtaagaagagcaagggccag
agcaaaaataagaagagtgacaaagacaagaagaaagacaagatgaccaagtccaaggct
tcttccaaaaatacctcctcaaatcagaagtcacctctggaggaacggcccaataagagt
ctgagaaacgacaaccgtcgccgtgatgacagcagtagcgatgaggaggcggcggagcgc
ggtgagaggagaccagagctcgaggaccaccacaaatcctctcgccaccggggtcgagaa
gaagacgcaccgcaacccacgtacgagagaccccaccgcgaccgtggggggcaccaagat
gaggagcagcctcgtggcaggcctgacagaggcagagactacgaggacagcgacagacag
acagagtcccgcaggcacaacagggacgatggggggaaatatgatgggaaacgccaagcc
ccccaggttgaccgggctgaccatgacagagtcagacaccgcagccctgagaaagagaag
gaaccagccaggtacagaaacagagagaggtcaaagtcacgggagaagagcagccgcaag
gagaaagacatggattcttccaggaactcgtacaggaacggggtggagcagcaagcagag
cgggcgaacaaggagaacagggagaaccgccatcaatctgacagatacagagaacccagg
agaaacgaggaacggagcagggatagctccccacatagacggagatag
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integrated database retrieval system
