Salmo trutta (river trout): 115161020
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Entry
115161020 CDS
T08542
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115161020
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115161020
Endosome - Golgi transport
Rab GTPases and associated proteins
115161020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
DNA_ligase_A_M
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
115161020
NCBI-ProteinID:
XP_029567544
Ensembl:
ENSSTUG00000046291
LinkDB
All DBs
Position
24:27823100..27849805
Genome browser
AA seq
1149 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNDFFLLQRRRGHGDTGGKFTGLLVGALDSVLDSNARVT
PFRILLQMPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVTGRQVAQEEEPEKFRETLLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVVPWAEVTRLERVSTGLMTDMVRVMTRRCQRDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRTYVLALFRLPRGERLQ
EVALCSVWTPHARCHTTGTLFTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDSLTSRLRALQWKHSMFRSKKSLTSSSPYYTFCYDT
MYCDGEDIEERPLRQTMNTEALMACYHHSQLDPNNSMSTMEQVKERLWEDHFPEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELASHPGYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVKGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDGQALMILTGFLDQV
KYDEGPSPPAPHPLLSQSGEEEGRPPVKQHTLITDLIADSYEKFGDLTVRQIEKLRCRHR
IQVLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGGTTLALQHHD
PGRPYVEQYRVDRVQFKSLYMLLVPWLCGFHTDTVAHRTFTLLDQDRDSLITFREFAGWL
DTLYCEELNEKVRLLYRLHIPPALTESEDDPSPLRSPQLSTTRPLHVELPNAPDVCVHVE
GEMRDFQEQLKQMLKDLAKEKEKDVEQPVPPMNQREFIQFCKTLYSMFHGNPDENELFQA
IATVTSLVLQIGEVGHRSRCSGSEVSSEGGAGDEVEDDHREGSQEDHPVFSTKEEEEGER
KEGTSKSSGSESQSEWAVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHERAG
LLMLQQGTS
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccggaggaagttttgctgaaaaatgcattgaagctttgggttaccgaa
aaatctaacgatttcttccttttgcagcgcagaagaggacatggggatacaggggggaaa
tttacaggtcttctggtgggagctctggactcagtgctggactccaatgcccgggtcaca
ccgttccgtatcctactacagatgcctgggtcacaggtcagctggactatagcttgtggt
gctgctgttggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgtcgccagcttcgtaaaagggaaagtcaagggt
ctaatagcggaggaggtaacggggaggcaggtggctcaggaggaggagcctgagaagttc
cgggagacgctgctgaagtttgagctgtgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtggtc
ccgtgggcggaggtgacgaggctggagcgggtctccacaggcctcatgacggacatggtg
cgtgtgatgacgcggcggtgccagcgggacttctccatgttcctgagcctggatgaggcg
tttggggtcattggtcagctggctgacatcgccctgcgacgcctgctggacagtgaaggc
ctggagctggaccgagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcgttgaggacatatgtcctagctctatttcggctaccgcggggcgaacgtcttcag
gaggtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacaacaggaacactc
ttcaccaccgacagctacctatgcttcgccagccgagaggagggccactgcagcctgctt
atccctctctcagaggtgatctccatagagaaggcggagagcaccagcctgctgccgaac
ccagtgatcgtcagcgtgaggagtaagaaagccttccagctgatcgagctgcaggacaga
gacagcctggtggacagcctgacatcacgcctcagagccctgcaatggaaacactccatg
ttccgcagcaagaaatctctgacctcctcgtctccctactacaccttctgctatgacacc
atgtactgtgacggggaggatatcgaggagagaccactacgtcaaacaatgaacacagag
gctctgatggcatgctaccatcactctcaacttgaccccaacaacagcatgtctaccatg
gagcaggtgaaagagcgtctgtgggaggaccacttcccagagtacggtcgaggtgtccac
atgttccgcacagagaagatccagaagctggttgccatggggataccagagtcgctacgg
ggagagctgtggatgaccttctctgatgcctcatcagagttggcatcccacccaggctac
tactcggggctggtgacagagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctcgctgccagaccaccccgccttccagaacgtcaaaggcattgcc
gcgttgcgccgcgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcgatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagagaatgctacctgactacttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaggagctgatccgggagcgtcttcccgagctggct
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctc
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcatcaaagccatcttccagctggggctagctgtgctggatgctaacgctacggcactt
tgtgctagtgcagacgacggccaggcactcatgatcctcactggttttctggaccaggtg
aagtatgatgagggtccatctccccctgcccctcaccctctcttgtctcagagtggggag
gaggagggcagaccgcctgtaaaacaacacaccctgatcactgacctcatcgctgactcc
tatgagaaatttggagacctgacggtgagacaaatagagaagttgcgatgcagacaccgg
atccaggttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtggtgacc
ccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaagacagag
cacttcatcaacctgtactggggcgatgggggcaccacattggccctccagcaccatgac
ccaggccggccctatgtggagcagtacagagtggaccgggtccagttcaagagcctgtac
atgctgctggttccctggctttgtggcttccatactgacaccgtggctcaccggaccttc
acactactggaccaggacagagactcactcatcaccttcagagagtttgctgggtggctg
gatacgctatactgtgaggaactgaatgaaaaggtcagattactgtatcgtttgcacata
cctccagccctgacagagagtgaggatgacccgtctccactgaggagccctcagctgtcc
actaccagaccactccatgtagagctgcccaatgcgcctgatgtgtgtgttcatgttgaa
ggggagatgagagactttcaggaacagttgaaacagatgttgaaagacctggctaaagag
aaggagaaggatgtggagcaacctgtacctccaatgaaccagagggagttcatccagttc
tgtaagaccctctacagcatgttccatggcaacccagacgagaatgagctctttcaggcc
atcgctacagtgaccagcctggtgctgcagatcggcgaggtcgggcaccgcagccgctgc
tcagggtcagaggtcagcagcgagggtggggccggagacgaggtagaggacgatcacagg
gaggggagtcaagaagaccaccccgtcttcagcaccaaagaagaagaagaaggagagaga
aaggaggggaccagcaagagttcagggtctgagagtcagagcgagtgggcggtcagctac
gctcagatcctggcttctctcctcacagaacagcagctagtcaacttctttgagaaaccg
atggacctgtcagcaaaggtggctgaggcaaaagtgaaacagtaccatgaaagggctggt
ctgcttatgctccagcaagggaccagctga
DBGET
integrated database retrieval system
