Salmo trutta (river trout): 115161045
Help
Entry
115161045 CDS
T08542
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR-like
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115161045
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
stru04050
]
115161045
Cytokine receptors [BR:
stru04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115161045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
SCIMP
TNFR_c6
DUF4501
Motif
Other DBs
NCBI-GeneID:
115161045
NCBI-ProteinID:
XP_029567586
Ensembl:
ENSSTUG00000036900
LinkDB
All DBs
Position
24:28650954..28692581
Genome browser
AA seq
481 aa
AA seq
DB search
MFQKGSHIESLFLCLLLVSCPPCLRSEYSSCGEFEFYNQTFSSCRPCPPCQPGQEPHMNC
GYGTKDEDFVCVSCPAGKYSKGKYEICRRHKDCEGLYRATVLTPGTPDSDADCGPCLPGY
YIQENRPRNLYGMVCHSCQNAPRNTKECMLTKVPSVSTSSTTMFPHPHKDPTGQGHLATA
LIIAMSTIFIMAIAIVLIIMFYILKAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVV
IFSEKDEFDKLKPTPPKTVKSENDASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLL
NLGNKPDLCLLSLGLLDRDKTGSNPTSPINANNISNGNANIINNNNYNKATGIQSRRKKI
LDLYARACSVAEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIG
GMSDGLQLFERISTAGYSIPDLLTRLVQIERLDAVESLCSDVLGGGDTHTVPLSSPRCAS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaaaggaagtcacatagagtccctcttcctctgtttgttgttggtgtcctgt
cctccctgtctcaggtcagagtacagtagttgtggagagtttgagttctacaaccagacc
ttcagtagctgccggccatgccccccatgccagcctggacaggagccccacatgaactgt
ggctatgggactaaggatgaggactttgtgtgtgtgtcttgtccggcggggaagtactca
aaggggaagtatgagatctgcaggagacataaggactgtgaaggtctgtaccgcgctaca
gtactcacacctgggacaccagacagtgacgcagactgtggaccctgcttacctgggtat
tacatccaggagaaccggcccaggaacctgtatgggatggtctgtcactcgtgtcagaac
gcaccgcgcaacaccaaagagtgcatgcttaccaaagtccccagtgtctcaaccagcagt
accaccatgttccctcaccctcacaaagaccccacaggacagggtcacctagcaaccgct
ctcatcatcgccatgtcaaccatcttcatcatggccatcgccatcgtcctcatcatcatg
ttctacatcctcaaagccaagcccagcggacaggcgtgctgctcaggtcaggtggtgaag
gctgtggaggctcagaccaacaaacaggaggacaagaaagatgttccagacaacgttgta
attttctctgaaaaggatgaattcgataaactcaaacccacgcctccgaagacggtgaaa
agtgagaatgatgcatcgtcagagaacgagcagctgttgagtcgcagtatggacagtgat
gaagaagctgccttggagaggcagggggcggctgatcctaaccccagcctctgtctcctg
aacctgggcaacaagccggacctctgcctgctctctctggggcttctcgacagggataag
actggatccaaccccaccagtcctatcaatgctaacaatattagcaatggcaatgctaac
atcatcaataacaacaactacaacaaggctacagggattcagagccggaggaagaagatc
ctggatctgtatgctagagcctgcagtgtggccgagggtctgagtcctacagaactaccg
tttgactgtctggagaaggccagtcggatgctgagctcctcctacagtagcgaggcagcc
gtggtgaagacctggagacacctggcagagagctttggcctgaagagggatgagatcgga
gggatgagtgacggcttgcagctgtttgaaaggatcagtaccgccggctatagcatccca
gacctgctcaccagactggtgcagatagagagactggatgctgtggagtcactatgttct
gatgttctgggaggaggagacacacacactgttcctctgtcctcaccgcgctgtgcaagc
gtctga
DBGET
integrated database retrieval system
