Salmo trutta (river trout): 115161137
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Entry
115161137 CDS
T08542
Name
(RefSeq) integrin beta-3-like isoform X1
KO
K06493
integrin beta 3
Organism
stru
Salmo trutta (river trout)
Pathway
stru03266
Virion - Herpesvirus
stru04145
Phagosome
stru04148
Efferocytosis
stru04510
Focal adhesion
stru04512
ECM-receptor interaction
stru04810
Regulation of actin cytoskeleton
stru04820
Cytoskeleton in muscle cells
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115161137
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115161137
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115161137
04148 Efferocytosis
115161137
09144 Cellular community - eukaryotes
04510 Focal adhesion
115161137
09142 Cell motility
04820 Cytoskeleton in muscle cells
115161137
04810 Regulation of actin cytoskeleton
115161137
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115161137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115161137
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115161137
04515 Cell adhesion molecules [BR:
stru04515
]
115161137
04090 CD molecules [BR:
stru04090
]
115161137
Membrane trafficking [BR:
stru04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
115161137
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115161137
Cell adhesion molecules [BR:
stru04515
]
Integrins
Integrin beta subunits
115161137
CD molecules [BR:
stru04090
]
Proteins
115161137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
115161137
NCBI-ProteinID:
XP_029567755
Ensembl:
ENSSTUG00000020581
LinkDB
All DBs
Position
2:complement(66706399..66745350)
Genome browser
AA seq
805 aa
AA seq
DB search
MGRPTHITQRITLWIGYFVLFAVTDVLGSNICTSRGASTCKQCLAVHPTCAWCSQEDFGL
GVAGSSRCDLKRNLLLAGCAPPTALEFPTSKLQVKEDRPLSNKAAGDTGDATQIQPQRLH
ITLRPDDSKRFTVKVRQVEDYPVDLYYLMDLSFSMNDDLFRLRTLGKGLAKEMGRTTSNL
RMGFGAFVDKPLSPYMYISPKEALLNPCHGINTTCLPQFGYKHVLSLTEEVSRFTEEVKK
QIVSRNRDAPEGGFDAIIQAAVCNEKIGWRQGASHLLIFTTDAKTHVALDGRLAGIVQPN
DGKCHLNSENMYSMSTIMDYPSLALITEKMSENNINLIFAVTSPVVPLYQNYSELIPGTT
VGTLSNDSGNVIQLILNAYAKIRSVIDMETQGVPEELSLSFNATCLNGEVIPGIKSCSGL
KIGDTVSFSVEARARGCPKDKRKTFVIKPVGFKDSLTVTITFECECKCQARAEPLSPVCN
NGNGTYECGICLCHPGRLGPRCECAEGDYSTTEQDRCSVPSTVGIGGAGGPGAAVCTGRG
DCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGELCSGHGTCDCGFCQCDSDWQGENCN
CSRRTDTCMSSLGLLCSGRGQCVCGACECTQPGAYGATCDKCPTCPDACTMKKECVECKH
FKRGKLFDDNTCTRICRDEIQLVDDLEFHDKNAVNCTYKDEDDCVERFQYYEDASGKSIL
FVVKEPDCPKGPDILVVLLSVAGAILVLGLVGLLIWKLLVTIHDRREFAKFEEERARAKW
DMGHNPLYKGATSTFTNITYRGNKE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggcctactcacataacgcaaaggattacactttggataggttatttcgtttta
tttgcagttactgatgttttgggttccaacatctgtacatcccgaggggccagcacatgt
aagcagtgtctggctgtacatcctacttgtgcgtggtgttcccaagaggactttgggctg
ggggtggcaggctcgtctcgttgtgacctgaagcgtaacctattgttggcgggctgtgct
cccccgaccgcccttgagttccccaccagcaagctgcaggtgaaggaggaccggcccctc
agcaacaaggcagccggagacacgggcgacgccacgcagatccaacctcagagactccac
atcaccctcagaccagatgactccaagcggttcacagtgaaggtgcgccaggtggaagac
tacccggtggacctgtattacctcatggacctgtctttctccatgaacgatgacctgttc
cgcctccgcaccctggggaaaggcctggccaaggaaatgggtcgcaccaccagcaacctg
cgcatgggcttcggagccttcgtggacaagccactgtcgccttacatgtacatctccccc
aaggaggccctgctcaacccctgtcatgggatcaacaccacctgcctgccccagtttggc
tacaagcatgtgctgtctctgactgaggaggtgagccgcttcactgaggaggtgaagaaa
caaatcgtgtccaggaacagagatgcccccgagggaggcttcgacgccattatacaggct
gctgtgtgtaatgagaagatcggttggcgtcagggtgcctctcacctcctgatcttcacc
accgatgccaaaacccacgtggcgcttgatggacgcctggcgggtatcgtgcagcccaat
gacgggaagtgccacctcaactcagagaacatgtacagcatgtctactatcatggactac
ccgtcactggctctgatcacagagaagatgtcagagaacaacatcaacctcatctttgcc
gtcaccagtcctgtggtgcccctctaccagaactacagtgagctgattcctgggaccact
gtgggcaccctgtccaacgactcaggcaatgtcatccagctcatattaaatgcctatgcg
aaaatccgctcagtgattgacatggagacacagggggttcctgaggagctgtctctatcc
ttcaacgccacctgtctcaatggagaggtcatccctggcatcaaatcctgctctggactc
aaaataggagacacggtctccttcagcgtggaggcgcgggcgcgcggctgccccaaggac
aagcgcaagacgttcgtcatcaagcctgtgggcttcaaggactctctgaccgtcactatc
accttcgagtgtgagtgcaagtgccaggcccgcgccgagccactcagccctgtctgcaac
aatggcaacggcacctacgagtgtggcatctgcctgtgtcacccggggagactggggccg
cggtgcgagtgtgccgagggtgactacagcaccacggaacaggaccggtgtagtgtcccc
tccaccgtgggcattgggggtgcagggggtcctggggcagcggtgtgcactgggaggggc
gactgcgtctgtgggcaatgcgtgtgccacagcagcgactttggcaaggtgtggggcaag
ttgtgcgagtgcgatgacttcaactgcctgcgctacaagggcgagctgtgttcaggccac
ggcacctgtgactgtgggttctgccagtgtgactcggactggcagggggagaactgtaac
tgctcccgccgtactgacacctgtatgtccagccttggcctgctgtgtagtggccggggc
cagtgtgtgtgcggggcctgcgagtgcacccagccgggagcctacggggccacctgcgac
aagtgccccacctgccccgatgcctgcaccatgaagaaagagtgtgtggaatgtaagcat
ttcaagcgagggaagctgtttgatgacaacacctgcacccgcatctgcagagacgagatt
cagctagtggatgaccttgagttccatgataaaaatgctgtgaactgcacctataaggac
gaggatgactgtgtggagcgcttccagtattatgaggacgccagtggcaagtccatccta
tttgtggtcaaagagcctgactgccctaagggtccagacatcctggtggtgctgctgtcc
gtagccggggccatcttggttctgggtctggtcggcctgctcatctggaagctgctggtc
accattcatgaccgccgtgagttcgccaagttcgaggaggagcgtgctcgcgccaagtgg
gatatgggccataaccccctgtacaaaggagccacctcaaccttcacaaacatcacatac
agaggcaacaaggagtga
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