Salmo trutta (river trout): 115161173
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Entry
115161173 CDS
T08542
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stru03021
]
115161173 (med1)
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
115161173 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
DUF3915
Motif
Other DBs
NCBI-GeneID:
115161173
NCBI-ProteinID:
XP_029567816
Ensembl:
ENSSTUG00000024444
LinkDB
All DBs
Position
2:66847656..66868810
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AA seq
1795 aa
AA seq
DB search
MAAVSMQGCSPNPARELTLSTQSGGNQALADRVKAEEGTEAEKQSRVNALLERLHAKHNA
SRPWQETSKVVRQAMEKRGQMNAAGHQLLLTCLETLQKALKVSSLPSMTDRLESIARQNM
LGSHLSPSGTECYITSDMFYVEVQLDTAGQLVDVKVAHHGENPASCPELIQHLRDKNFEE
FSKHLKGLVNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRLATNANTVETILHGSVG
LLTARSGGHLVSLQCYVSPYDVFEERTGSQLNFTDTNVPRSLGVSVSVTVEGTSSIYKLP
IAPLITGSHPVDNKGTPSFSSVTNSNCVDLPASFFLKMNLPMPFSLSFIQRMGNATGIPV
FETPPTLSPLYELIVQSQLQEEVGNPLTTPTHAMRFYASLPDQHHCYFLNGDAPVQDGHS
LQGTLVSKIPFRHPAQVPALLDVIRHQAAANTLIGSCVKRTFIKDDTPGLLQFEVCPLTD
SSFSVSFQHPVNESLVCVVMEVIDSRQVSCKLYKGLSDALICTDDFITKVVQRCMSIPVT
MRAIRRKAETIQADTPALSLIAETVEIMVKKNLPPAGSPGYGMGTGVDPTNPMGLPGVGG
GNTPTNSGGGNFAGPITSLFGINRSQSQGGECTPQGGAAGQQQQQQGGQSGDDFSKVTQN
PILTSLLQITGAVGTSPTPQNSSSGSQPHQTPPPTSSPATNTKNHPMLMNLLKDNPAQDF
AALYGSSPLERQNSSSGSPRTDGMGGTCPGSGTKGKKKRPRGMEKGGVPGAGGGGMGGMN
KQQSGSMQPHHHQHQPTEDDFHRELFSMDVDASQNPIFDVNLPGDGLDTPHSITPAPSQC
GTPPSGAGVSYHSQSHVQSQQQQQPPPGSSLPRMVRLSSSDSIGADINEILSDLPEQTGK
GGSGSHGQHHLGSGEDGGPLGTPHRDSSSSGQGSAVFEADIFNTNSNENPFTNAADLIAE
ATATTPTSDSSSTNFFPDTVDFNPELLTSSHGFPQAYFDDSSPSADGDLDLVKGFGGSSQ
QNTPSGTPQNPTPHGQSTPDPSLKDPFDMSGMVFGGSSGGGKPLLGQALDLGDSHSSHMG
GGQSPLMMAMGGGSSDFKSGEAKAKQQQQQGLMRMKDDNGGGSGRSSGMGMTGSSSTEGK
QVKRSRTPSSEGKSKDKPPKRKKLDPDGKSPSHSTGGRPYTPPSGGSGSGGSIGGGSKSP
GSSGRSQTPPGGATPPIPKITIQIPKGTLSGGKTSSHGGYTSSSSAGGGTGGAGSTSGSK
SHHSHSSSSSGKIKSKEGTLGQGISSKPGSVGGGVGGGPPQMKSSSQGMGVGKPGSSPIT
KHGLSGSGSSGGGVGSGNKMKPQGGKPPGSLMNPNIKPNISPSHSRPSGSDKLSSTMKMQ
QSQVPGTPPSSKAKSPMGSGGGGLVGSKSSSGGGMGSQKQLGGGGSSSGSSSSTSSSSSS
SSGSMPFSGGSQSQYGSSGGGGGGCGGGQGNNANNPNAKGKSPSRNKKPSLTAVIDKLKS
VGGGGGPEDEGEPPVGGSGGTGGGGPGGGPPNLGPSSKHGMSSQGGEYPIKREKSEKEGK
SKVSVSVGASGDKKLIDPKTGGVSSTGVAKIIISKPDGGSPSIKAKVTLQKPGEGSGESM
RPQLSGLKASPLFSGSTPKHDRSSPSHSRSPGYTPLNHDSESESGSSSVAEKSHQNSPSS
DDDQAMRPVPPQDYMSSMPLSSGEKHKKHKKEKKKQKERERERDKDREREKKKSSMSTGN
VLHGPMKADSWSRSPILASDTSLSMMGSDRPSRPSPVYMRNEDDDLMDSALTGNL
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtttctatgcagggctgtagtccaaacccagcaagagaacttaccctttca
acacaatctgggggaaaccaggctcttgcagatcgggtaaaagctgaagaagggaccgaa
gccgagaagcagagtcgcgtgaacgctctgttggagagactccatgccaaacacaatgcc
tcacggccttggcaggagaccagcaaggtggtgcgccaggccatggagaaacgtggtcag
atgaatgcggctggacaccagctcctgctcacctgtctagagaccctgcagaaggcactg
aaagtgtcctccctgccttccatgacagatcgcttggagtccatcgcacgacagaacatg
ctggggtcccacctgagtccttcggggacagagtgttacatcacttcagacatgttctat
gtggaggtgcagctggacacggctggtcagctggtggatgtgaaggtggcccaccacgga
gagaacccagcgagctgtccggagctgattcaacacctgagggataagaactttgaagag
ttctccaaacatcttaagggcctagtcaacctgtacaagcttcctggagacaataagctg
aaaacaaagatgtaccttgcacttcaatccctcgagctggatcttacgaagatgatgcac
atgttcaggttagccaccaacgctaacactgtggagaccatccttcatgggagcgtgggc
ctgctgacagccaggagcgggggccatcttgtctccctccagtgctacgtgtccccgtac
gatgtgtttgaggaaaggacaggctcgcagctcaacttcaccgacacaaatgtccctcgc
tctctgggtgtgagtgtatctgtgacggtggaggggacctcgtcaatctacaagctaccc
atcgcccccctcatcacgggatctcacccagtggacaacaagggaaccccttccttctcg
tctgtgaccaactccaactgtgtggaccttcctgcctctttcttcctcaagatgaacctg
cccatgcccttctccctctccttcatccagaggatgggcaatgctacagggattcctgtg
tttgagacaccccccaccctgtcgcccctctacgagctcatcgtccagagtcaactccag
gaggaggtggggaaccccttgaccacccccacacacgccatgcgcttctacgcttcgttg
cccgaccagcatcactgctacttcctgaatggcgacgccccggtgcaggacgggcactcg
ctgcaggggacgctggtgtccaagatccccttccgccacccagcccaggtgcccgcccta
ctggatgttatcaggcaccaggcggccgccaacacgctgattggcagctgcgtcaagcgc
accttcatcaaggatgacactccagggctgctacagtttgaggtgtgtcctctgaccgac
tccagcttcagcgtctccttccagcaccctgttaacgagtccctagtctgtgtggttatg
gaggtgattgactccaggcaggtgtcctgtaagctgtacaaaggcctatccgatgccttg
atctgcactgacgattttatcaccaaagtggtccagaggtgcatgtccatccctgtcacc
atgcgggccatccgacggaaagcggagaccatccaggcagacacgccagccctctccctg
attgccgagacggtggagatcatggtgaaaaagaacttaccccctgctggaagccccggg
tacggcatgggcacaggggttgaccccaccaaccccatggggctcccgggtgtcggtgga
ggcaacactcccacgaacagcgggggaggtaactttgccggcccaatcacatctctgttc
gggataaatcgcagccaaagccaggggggagagtgtacaccccagggtggggcagctgga
cagcaacagcagcagcaggggggtcaatcaggggacgacttcagcaaagtgacccagaat
ccaattctgaccagcttgctgcagatcacgggcgctgtgggcactagccccactccccag
aacagctcttccggatcgcaaccccaccagactccgccccccacctcctcccctgccacc
aacaccaagaaccaccccatgttaatgaacctgctgaaagacaaccccgcccaggacttt
gctgccctctatggctcgagtcccctagagaggcagaactcttcctctgggtcgccacgt
actgatggcatgggtggcacctgccccggaagtggcaccaagggcaagaagaagcgtccc
agagggatggagaagggtggggtgcctggggcaggaggaggggggatgggagggatgaac
aagcagcagtcggggtctatgcagcctcaccaccaccagcaccagcccaccgaggacgac
ttccaccgcgagctcttctccatggacgtggacgcctcccagaatcccatcttcgacgtc
aacctgcctggcgatggcttggacacgccccacagcatcaccccggcgcccagtcagtgc
gggaccccgccttctggcgccggagtgtcctaccactcgcagtcacacgtccagtcccag
caacaacagcaaccgcctccgggatcatccttgcctcgcatggtacgcctatcgagctcc
gacagcatcggcgcagacataaacgagatcttgtcggacttacccgagcagacgggtaaa
ggcggcagcggttcgcacgggcagcaccacctgggcagcggggaggacgggggccccctg
ggcaccccgcaccgggactcgtccagctcgggacagggcagcgccgtgttcgaggcggac
atcttcaacaccaacagcaacgagaaccctttcacgaacgccgccgacctgatcgctgag
gcgaccgccaccacccctactagcgactcctcgtccaccaacttcttccccgacacggtg
gacttcaaccccgagctgctgacctccagccacggcttcccccaggcctacttcgacgac
agctcacccagcgccgatggagacctggacctggtcaaaggcttcggtgggagcagccag
cagaacacgccatccggcaccccccagaaccccaccccgcacggccagagcacacccgac
ccctccctcaaggaccccttcgacatgtcaggcatggtgttcgggggcagcagcggaggg
ggcaagccactgctgggtcaggccctggatctaggtgactcgcactcgtcccacatgggg
ggaggccagagccctctcatgatggccatgggaggggggagcagtgacttcaagagcggc
gaggccaaagccaaacagcagcagcagcagggacttatgaggatgaaggatgacaatggg
ggcgggagtgggcgcagctcagggatggggatgaccggcagcagctccactgaggggaag
caggtgaagcgaagccgcaccccttccagcgagggcaagtccaaagacaagccccccaaa
cgcaaaaagcttgatcctgatgggaagtccccatctcacagcacaggggggcgaccctac
accccacccagcggaggctcaggatctggaggcagcattggcggaggatccaagtctccc
ggtagctccgggcggtcgcaaaccccaccaggaggtgccacaccacctatccctaagatc
accattcagattcccaaaggaacactgtctggtgggaaaacctcgtcccatggcgggtac
acctcaagcagttcggcgggtggtggcacggggggtgcaggcagcactagcggaagcaag
agccatcattcccactcctcgtcttcctcaggcaagatcaagagtaaggagggcaccctg
ggccaaggcatcagctccaagcctggaagcgtgggagggggtgttggaggtggacccccc
cagatgaagagctcttctcagggaatgggcgtggggaagccaggctcttctcccatcacc
aaacatggactctccgggtcgggaagcagtggtggcggggttggaagtgggaacaagatg
aagccgcaggggggcaagcctcccgggtccctcatgaaccccaacatcaagcccaacatt
tccccctcgcactctcgccccagtggctctgacaagctctcttccaccatgaagatgcag
cagtcgcaagtcccaggaactccgccgtcctccaaggccaagtcccccatgggctcaggg
ggcggcggcttggtaggttctaagtcgtcctccggtggggggatgggatctcagaagcag
ctgggcggtggtggttcctcttccggctcctcgtcttccacctcctcctccagctcctct
tcctctggctcaatgcccttttccggaggctcccagtctcagtatggctctagtggaggt
ggagggggtggttgtggtgggggacaagggaacaacgcaaacaaccccaacgccaaagga
aagtcccccagccgcaacaagaagccctcgctgaccgccgtcatagacaagctgaagagc
gtcggcgggggagggggtcctgaagacgagggtgaaccgcctgttggtggcagcggtggg
accggtggaggcggaccagggggcgggccaccaaacctcggcccctcctccaagcacgga
atgtcctctcaaggcggggagtacccgatcaaacgagaaaagtctgagaaagagggcaag
tccaaagtgtctgtgtcggtgggagccagcggggacaagaagctcatagatcccaaaact
ggaggcgtgagcagcacgggcgttgccaagatcattatcagcaagccggatggcggctcc
cccagcatcaaggccaaggtgaccctgcagaagcccggagagggctcgggggaatccatg
cgcccccagctttctggtctcaaagcctcacccctgttcagcggctccacgcccaagcat
gaccgctcttcccccagccacagccgctcgccgggctacacgccgctcaaccacgacagc
gagagcgagtctggcagcagctctgtggcagagaagtcccaccagaacagccctagctcg
gacgacgaccaggccatgaggcccgtgcctccgcaggactacatgagctccatgcctctc
agctccggggagaagcacaagaagcacaagaaggagaagaagaagcagaaggagagggaa
cgcgagagggacaaagatagagagagggagaagaagaagtcgtccatgtcaactgggaac
gtcttgcacggtcccatgaaggctgacagctggtcgcggtcacccattttggcctcggac
acatctctctctatgatgggctcggaccgtccctcccgccccagtcctgtctacatgcgg
aatgaggacgatgacctcatggactcggccctcactggtaacctataa
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integrated database retrieval system
