Salmo trutta (river trout): 115161228
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Entry
115161228 CDS
T08542
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
stru
Salmo trutta (river trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
115161228
NCBI-ProteinID:
XP_029567893
Ensembl:
ENSSTUG00000003467
UniProt:
A0A673W4H1
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Position
24:complement(36755817..36778701)
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AA seq
750 aa
AA seq
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MVVPPFSAPLPLLVALLQLAVLPLVHAGAYYRHKQHPQQHQPTPHLSHMGIGGKEQHPQQ
HWPGKEMPHMQYPQYRKEIPQMSMHMGKANPHKGGVVNGGQDKGQTIPSGAVGGLPGGLP
GEQGPAGPPGPEGPSGPPGPPGEGQPGREGKPGHAGPPGFPGVGKPGLPGIPGKPGSMGE
PGVPGELGHSGREGPMGQQGPQGSPGPPGLPGIGKLGAGGLPGQPGPRGEPGHKGLPGLP
GLPGPKGDKGIGQPGQPGHKGLAGPPGPPGQGGMPGVGKPGMNGMSGPPGGPGKPGLPGE
QGLAGPAGEGGEPGPPGLPGQGKPGQNGLPGQPGMPGGKGHPGPPGFPGKPGLPGFGKPG
FPGPKGDKGMGGMPGGPGPKGDKGHGGLPGMLGQPGSIGPAGPLGPMGPPGGLGQPGPKG
EAGEGGHKGLPGGQGEPGPTGLTGQNGFPGEGGEPGPRGPTGPVGPQGEGGHKGLPGAPG
IPGLPGPKGEGGLPGEKGPQGPKGIPGLGGAGGPIGPPGAPGTKGDSGPPGLPGVDGKGN
PGVPGPLGPTGKEGPGGPPGNPGQPGPPGPPGPPGPTDMGAVLPEMGFPPGLDGVKTAGY
GKKGKYGGNGGEVMGPNGLEMPAFTALVTTPFPPVGTAVVFDKILYNGRQNYNPQTGVFT
CDMHGIYYFAYHISCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGSAVLPLQPGDTV
YLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgcctcccttctccgcccccctccctctcctagtggctctgcttcagcttgca
gtactacctcttgtccacgcgggggcgtactacagacacaagcagcacccgcagcagcat
cagcccactccacacctgtcccacatgggcatagggggtaaggagcagcaccctcagcag
cattggccgggaaaagagatgccccacatgcagtacccccagtacagaaaagagatccca
cagatgtccatgcacatgggcaaggcgaacccccacaagggtggagtagtcaacggtgga
caggataaagggcaaaccatccccagtggtgcagtgggaggtctccctgggggtctgcca
ggagagcagggcccagctgggcctcccggacctgagggtccctctgggcctccaggacct
cccggggaaggacagccaggaagggaaggaaaaccaggccacgctggtcccccaggattc
cctggagtaggaaaaccaggtctcccaggaattccaggcaagccaggcagcatgggagag
ccaggagtacctggagaattgggccacagcggcagggagggtccgatggggcagcaaggg
cctcaggggtcccctggtcctccaggtcttccagggataggaaaactaggggctgggggg
ttgccaggacaaccaggacccagaggagagccaggacacaagggcctgccgggactacca
ggattaccaggacccaagggtgacaaggggattggacagccaggacagccaggccacaaa
ggactagcaggacctcctggacctccaggacagggagggatgcctggtgtgggcaagcct
ggaatgaatggcatgtcagggccaccaggaggaccagggaaaccaggcctccctggagag
caggggctggctggaccagcaggagagggcggagagcccggtccaccagggctgccaggt
cagggaaaacctggccagaatggtctgccgggacaaccagggatgcccggtggaaaaggg
cacccaggccctccaggttttccagggaagcctggattgcctggattcggaaaaccagga
ttcccaggacccaaaggagataaggggatgggtgggatgcccggaggcccaggaccaaag
ggagacaagggccatggaggactgcctggtatgctaggacagcctggatcaattggacca
gctggtccccttggccctatgggaccccctggaggtctgggtcaaccagggccaaaaggc
gaggctggagaaggaggtcataaggggttgcctggtgggcaaggggagcctggtcctact
ggactgactggtcagaatggcttccctggagagggaggagagccagggccaaggggtccc
accgggcctgtaggaccccaaggggaaggcggacacaaagggttaccaggcgcccctggc
attccaggcctacctgggccaaagggagagggaggacttccaggcgagaagggtccccaa
ggtcctaagggaattccaggtctgggaggtgcaggtgggccgatcggacctcctggtgct
cctggaactaaaggtgacagcggacctcctggtcttcccggcgttgatggtaagggaaac
ccaggtgtccctggtcctcttggacctacaggtaaagaaggtcctggcggaccaccggga
aacccaggccagccaggtccacctggtcccccaggccctcccggacccactgacatggga
gcagtcctccctgagatgggttttcctcctgggctggacggagtcaagactgccggttat
ggcaagaagggaaaatatggaggaaacggcggagaagtgatgggccccaatggcctggag
atgcccgcgtttacggctctggtgaccacgcccttcccacctgtgggcacggctgtggtg
ttcgacaaaatcctgtacaacggccgtcagaactacaacccccagacaggcgtgttcacc
tgcgacatgcacgggatctactactttgcctaccacatcagctgcaaaggggccaacgtg
tgggttgcactgatgaggaacgatgagcctgtgatgtacacatatgatgagtataaaaag
ggcttcctggatcaggcgtcagggagtgcagtgttacctctacagcccggggacactgtg
tacctccagctaccctcggaccaggccgcaggactatacgctggccaatacgtccactca
tccttctctggatacttgttgtaccccatgtaa
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