Salmo trutta (river trout): 115161258
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Entry
115161258 CDS
T08542
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
stru
Salmo trutta (river trout)
Pathway
stru04137
Mitophagy - animal
stru04144
Endocytosis
stru04145
Phagosome
stru04148
Efferocytosis
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115161258 (rab5c)
04145 Phagosome
115161258 (rab5c)
04137 Mitophagy - animal
115161258 (rab5c)
04148 Efferocytosis
115161258 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115161258 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115161258 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stru04147
]
115161258 (rab5c)
04031 GTP-binding proteins [BR:
stru04031
]
115161258 (rab5c)
Membrane trafficking [BR:
stru04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
115161258 (rab5c)
Endosome - Lysosome transport
115161258 (rab5c)
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115161258 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
115161258 (rab5c)
Exosomal proteins of colorectal cancer cells
115161258 (rab5c)
Exosomal proteins of bladder cancer cells
115161258 (rab5c)
GTP-binding proteins [BR:
stru04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
115161258 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
115161258
NCBI-ProteinID:
XP_029567958
Ensembl:
ENSSTUG00000025880
LinkDB
All DBs
Position
2:67294066..67303712
Genome browser
AA seq
220 aa
AA seq
DB search
MAGRGGPARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFQEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNRDTFTRAKNWVKELQ
RQASPNIVIALAGNKADVANKRAVDLQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEAQGTAGAGGRARAGVDLQEPAPQGRSGQCCGGST
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgtggaggaccggcgcgacccaacggcccggcggcaggcaacaagatctgc
cagttcaagctggtgctgctgggggaatcggcggtgggcaagtccagcctggtgctgcgc
ttcgtcaagggccagtttcaggaataccaagagagcaccatcggagctgccttcctcaca
cagactgtctgcctggacgacacgacggtcaagtttgagatttgggacacggcaggccag
gagcgataccacagcctggcgcccatgtactacagaggagcccaggcggcgattgtggtc
tacgacatcaccaacagagacacttttacgcgagcaaagaactgggtgaaggagctgcag
agacaagccagccccaacatcgtcatcgctctggctgggaacaaggccgacgtcgccaac
aagagagccgttgatctccaggaagcacaggcctatgccgatgacaacagtctactgttc
atggagacttcagctaagactgctatgaatgtcaacgaaatcttcatggccatagcaaag
aagctgcccaagaacgaggctcagggcacagccggggcagggggccgggcccgggcagga
gtggaccttcaggagcccgccccccagggccgcagcggccaatgctgtggcgggagcact
tag
DBGET
integrated database retrieval system