Salmo trutta (river trout): 115161280
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Entry
115161280 CDS
T08542
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115161280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115161280
03021 Transcription machinery [BR:
stru03021
]
115161280
Transcription factors [BR:
stru03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115161280
Transcription machinery [BR:
stru03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115161280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
115161280
NCBI-ProteinID:
XP_029567981
Ensembl:
ENSSTUG00000013570
LinkDB
All DBs
Position
24:complement(39452463..39489716)
Genome browser
AA seq
753 aa
AA seq
DB search
MLENKGAPEVDSRMSNASETSKCGMESQSGDGNTEIQTNGLDFQRQTVQTTSAITNAHTQ
ALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQLLLQQAQAQLLAAA
MQQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGYPYEMA
TFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQGQSLLT
QLPQSQANLLQTHPSITLATQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEEPSDLE
ELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLL
EKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEKRFLEQ
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGSSPIKTIFTP
TIPLVASTASLVTSNTPTTLTVNPVMPLSSSSVSGLTFTGTTIGATTNTASVISTAPMVT
AVTSSPSLSPSPTALQTTAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLSAALQG
AAQLPTSTSFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNPAMLSNSTLATIQGL
WSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNLVSAGA
AGGGALQVSADHQVTTATVPVPASTITTASRAQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaataaaggggcaccagaagtggattctagaatgagtaatgcgtcggaaacg
agtaaatgtggaatggagagtcagagtggggacggaaacacagaaatccaaacgaatgga
ctggactttcagaggcagacggttcagaccacaagcgcaatcaccaacgcacacacacag
gctctcctccaacagtccaagtcagaagactcgggtgcaattccaacctccgtccagcag
ggcgtgctgcctcaggcccagctcatgctggctgggggacagatagctggattgaccctg
tctccagcgcagcagcagttgttgttgcagcaggcccaggcccagctcctagcagcagcc
atgcagcagcagtcagccagccagcagagcagcactacgggggcaagcatctctgcctct
gcagccacccccatcacacaactgcccctgtcccagcccatccagatcacctctattccc
tctggttctacccatcttccaggccagctaagccagctgggatacccgtatgagatggcg
accttcagcagttacctacctcagttacaacagctgcagcagcagaacctgaccatgccc
cagtttgtcctggttcagcctggccaccacatcgccacccaactgcagcctggccagttc
atcatctcacagtcgccgcagggccagcagagtctcctgcaaggccagagtcttctaact
caactacctcaaagccaagccaacctcctgcagactcatcccagcatcacactcgccaca
cagccagcgactccgacccgcacgatagcagccacgcccatccagcctctgtcccacagc
cagacctcgccccctaaacgcctggccacgcccagtctggaggagcccagtgacctggag
gagctggaacagtttgccaagactttcaaacagagacgcatcaaactgggcttcacacag
ggagatgttggcctggccatgggcaagctttacggtaacgacttcagccagaccaccatc
tcccgcttcgaggccttgaacctcagctttaagaacatgtgcaagctgaagccactgctg
gagaagtggctcaacgatgcagtttatgcagacaacctgtcatctgaccaggccctgtcc
agccccagcgccctgggctcccctggcctgggtatggaggggctgaaccgccgacgcaag
aagaggaccagcatcgagaccaacatccgcttggccttagaaaagagatttctggaacag
aaccaaaaacctacctctgaggagatcaccatgatcgccgaccagctcaacatggagaag
gaggtgatccgggtttggttctgtaaccgccggcagaaagagaagaggatcaaccccccc
agcggtggatacagcaacacagggacaggcagcagccccatcaaaaccatcttcacccct
acgatccccctggtggccagtacggccagccttgtgaccagtaacacaccgaccacactg
actgtaaacccagtgatgcctctcagcagcagcagcgtgtctggcctgaccttcacaggc
acgaccataggagcgaccacaaacacggcatccgtcatctccacggcacccatggttact
gcggtgaccagctccccatcgctaagcccctcccccacggccctccagaccacggcggcg
gagacgggcggaacccaggagcacacggtggtcacgcaggcaccgtcgtccctagcgacc
actctggggacgggtcaggtgatggtggctggactgggcctgtcggccgccctgcaaggc
gccgcccagttacccaccagcactagtttcgctgccatggccgggcttaaccaaggactt
atggcgtcatcgcagttcactcctgggggggccttgctgagcttggctccaggggggctg
ggaggggctctgaaccccgccatgttgagcaacagcaccctagccaccatccaaggtctg
tggagcgccctggcatcaggcggcgctctccccatcacctcgctggacgggagcggtaac
ctgctgttcgccaatacctctgctggcagcacccccaacctgatgcaacccctcttcctg
aacccccagaacctgtccctgctcaccaccaaccctgtcaacctggtgtcggccggagct
gctgggggaggggccctgcaggtctcagctgaccaccaggtcaccacggcgactgtacca
gttcccgcctccaccatcaccacggcctccagggctcagtga
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