Salmo trutta (river trout): 115161352
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Entry
115161352 CDS
T08542
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
stru
Salmo trutta (river trout)
Pathway
stru04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115161352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115161352
Enzymes [BR:
stru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115161352
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115161352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_UBOX
fn3
zf-C3HC4_4
zf-C3HC4
PRY
zf-C3HC4_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_2
zf-RING_5
Pur_ac_phosph_N
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
115161352
NCBI-ProteinID:
XP_029568131
Ensembl:
ENSSTUG00000013911
UniProt:
A0A673YDI2
LinkDB
All DBs
Position
24:43207894..43279027
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILISHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERVAPDGTAMTSPSETVQ
CQFCEQDPPQDAIKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPGCYLSERSEQEEADQ
EISTQTLDSNLGNLIKRNNELETLMGKLIQICQHVEGNASRQENKLLEECDLLMDIIHQR
RQIIATKINEGKAIRLRKLAQQIATCKQIIERSSSLITQADHTLRETDHTRFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLESLDYLTAPNPPIIREELCTASY
DTVTAHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYIFMVKAINQAGSRSSVPGKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKS
HTQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDITFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCQD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgcttcaactgtgcccaccgcatcctgatctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactgaagcgtaacgtcactttgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagcgagact
cgccgtgagcgggtcgccccggacggcacggccatgacctcccccagcgagacggtgcag
tgccagttctgtgagcaagaccctccccaggatgccatcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcttgaaggccacccaccccaataagaagcccttcaccagc
caccgtctgatcgagcccatgccggactgccacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccatcaagtagccgccctcagcgaccgctatgagaaa
ctcaagagaactccaggctgctatctcagtgagaggagtgaacaggaggaagcagaccag
gagatatctacgcaaaccttggactccaacctcggcaatctgattaagaggaacaatgag
ttggaaactctgatgggcaagttgatccagatctgccaacatgtggagggtaatgcatca
agacaagagaacaagctccttgaagagtgtgaccttctgatggacatcatacatcagaga
agacagatcatagccaccaagataaacgagggcaaggctatccggctgcggaagctagcc
cagcaaatcgccacctgcaagcagatcatcgagagatcgtcatccctcatcactcaggca
gatcacaccctgagagagacagaccacacccgcttcctgcaaacagccaaaagcatctgc
gagagagtgtccatggcaacagcatcctcgcagatcctgatcccggagataaacctgaat
gacacctttgatacgtttgcgttggactttacaagggaaaagaaaatgctggaaagcttg
gattacctcacagcaccaaatcccccaataatccgtgaggaattatgtacggcatcgtac
gacaccgtcaccgctcactggacgtctgatgatgagttctgtgtcgtctcctatgaactg
cagtatgccatcttcactggacaagccaatgtcgtcagtttgtgtaactcagcggacagc
tggatgattgtgcccaacatcaagcagaaccactacacagtgcatggactccagtgtggc
accaagtacatctttatggtcaaagctatcaaccaggcagggagtcgcagcagtgtacct
gggaagctgaagaccaacagtcaaccgttcaagttggacccaaagtctgctcataagaag
ctgaaggtctcccatgacaacctgacggtggagcgagatgagacgtcgtccaagaagagc
cacactcaggaccgcttcaccagccagggcagctatggcgtcacagggaatgtgtacatc
gacagcgggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacacgagtggatcggcaagaactcggcctcgtgggta
ttatctcgatgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgag
ccgtccccccacctgcgtcgcgtgggggtgttgctggattacgacgccggttccctggcc
ttctacgatggcgccggctcacagcacctgtacacgttcgacatcaccttcgcccagcca
gtctgtcccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatc
ccagaccacctcgaggggacagactgccaggattaa
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