Salmo trutta (river trout): 115161355
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Entry
115161355 CDS
T08542
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115161355
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115161355
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
115161355
NCBI-ProteinID:
XP_029568143
Ensembl:
ENSSTUG00000014355
LinkDB
All DBs
Position
24:complement(43381497..43385317)
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AA seq
980 aa
AA seq
DB search
MMRGILTGWHRWIFGFITLQMLFVSLAQSEGNTLKYQTNEERSPGTVIGNLAKDMSLSRS
FSSKTNFRMMKQFNNSFIRVRETDGELTVGERIDRERICRHTLQCLITFDVVSFSKERYN
LIHVEVEVKDINDNSPEFPNKESTVEISENADVGFRIPLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKELDRETQSSYAMELIATDGGNPFSSGSTKITIKVTDF
NDNRPVFDQNNFSVTLPEDAPVGFVLLDLNAVDPDEGLNGEVVYGFGKQVSAEIRALFEV
YSKSGRLTLKNPVDFETKKTYELDVQATDLGANPIPAICKIIINVKDVNDNAPEISITPM
TSISTGIAYISETAEKDSLVALISTADRDSGVNSQVHCTLYGHDHFKLKQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPHFTKHVYEVSVVENNA
PGAYITTVEARDADLGTNGKITYRLLDSVIMGSPVNTFVSLNAISGSIYALRSFNYEVMK
HLEVHVQASDGGSPQLQSSAIINLKIVDQNDNSPSIIEPVLNKGSAEVFLPKHAPAGYVV
TQIKAMDADEGINAQLSYNITEGGHLGFSINKVTGKLHVSCELNYDLSETLRVLVAVNDN
GTPSLTSTATIHLTLIEGTPPSVPAMVQNDSEEVFEWDMSIAIIIALAGSCSLLLLGIIL
ITTTCSRHKREKREAGCNDKVDIQHVEKGESSHIDSLITNHKSNVFDVHPFPEEALLASS
NTIKTAPGDGRQEQECDFDNGIMESKLEGYSTLPGYRKETLRPITIWKGNSFTTISARDP
QFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTSECKILGHSDRCWSPSASRP
NTSLSHGPHLSTFSKTASLPRNTLQRDTYYQQAHLPKTNGLQSVYEKVQHQEFDYILVCP
PTPARILETGEISLPEYGHS
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtggcattttaacaggttggcatcggtggatttttggattcataacactacaa
atgttatttgtgtccctggctcagtctgagggaaatactctgaaataccagactaacgag
gagcgaagtccaggaacagtgatcggaaacctggccaaggacatgtccttgagtcgctct
tttagctccaagactaattttagaatgatgaaacaattcaacaattcttttatcagggtg
agagaaaccgacggggagcttactgtcggggaaaggattgacagagagagaatctgcagg
cacactttacagtgtctcatcacttttgatgttgtcagtttttcaaaagagaggtacaat
ttgattcatgtcgaggtggaggtaaaagacattaatgataactctccggagtttccaaac
aaggaatctacagtggagatctctgaaaatgctgatgtggggttccgtattcctttggac
ccagccgaggacgcagacgtcggatcaaactacatccaaagctatcaaatttctgtcaac
agtcatttttccattgatgtgcttttgagagcagatggggttaaatatgcggagttggtg
ctaatgaaagagttagacagggagactcagtcatcttatgcgatggagcttattgcaacc
gacggaggaaacccatttagctcgggttcaacaaaaataacaataaaagtgacagacttt
aatgacaaccgtcctgtttttgaccagaataatttctcggtcactttgcccgaggacgca
ccggttggattcgttttattggacttaaatgcagttgatccagatgagggtttaaacgga
gaggtggtctatgggttcggaaaacaggtttctgcggagatccgagcacttttcgaagtg
tacagtaaatccgggcgcctaacgctcaagaacccagtggattttgagaccaagaaaaca
tatgagttagacgtgcaggcgactgatctaggagccaacccgatccccgccatctgtaaa
ataataattaatgtcaaagacgttaatgacaatgccccagaaatcagtattacgccaatg
acctccatctcaacaggcatcgcgtatatcagcgagaccgcagaaaaggacagcctagtg
gcgctgatcagcaccgcggacagggactcgggcgttaacagccaggtccattgcacctta
tatgggcacgaccatttcaaacttaaacaggcctatgaggacagctacatgattgttacc
gcagcagccctggacagggagaagataagcgagtacaatttaactgtgatggctgaagat
ttcgggtcacctccattgagaaaaatcacacaatacaccataaggctaagcgacgagaat
gacaacgccccacactttactaaacatgtctatgaagtttctgtggttgaaaataatgca
ccaggggcatatattacaactgttgaggccagagatgcagacttggggactaatggcaaa
attacatacagactattagacagtgttataatgggatcacctgtcaacacgtttgtatct
ctaaatgcaatctctggttcaatatatgcactgagaagcttcaactatgaagtcatgaaa
catctggaggtacacgtccaggcaagtgatgggggctcaccccagcttcagagcagtgcc
atcatcaatctaaaaatagttgatcagaatgacaactctccgtccatcatagagcccgtc
cttaataagggatctgctgaggttttcctgcccaaacatgcacctgcaggttatgttgta
acccagataaaggccatggatgctgatgaaggcataaacgcacagctgtcttacaatatc
acagaggggggacacttgggtttctccattaacaaggttactgggaagttacatgtgagt
tgtgagctgaactacgacctgtctgaaacactgagagtcctagtggctgtcaacgacaat
ggaacaccttctctgacctccacagccactatacacctcactctcatcgaaggcacccct
cccagtgttcccgctatggtccaaaacgacagcgaggaagtctttgaatgggacatgtcc
atagctattatcattgccttagcagggagctgctccctcctcttgctaggcatcattctg
atcactaccacctgcagtcgacacaaacgggagaagagagaggcgggatgcaatgacaaa
gtagacatacaacatgtggagaagggggagagcagtcatattgattcattgatcaccaac
cacaaaagcaatgtgtttgatgtacacccttttcctgaggaagcactgttggcctccagc
aacacaataaaaacagccccaggtgatggcagacaagaacaagagtgtgactttgacaat
gggataatggagagtaaattagagggttattcaacactgcccggttataggaaagaaacc
ctccgacccataaccatatggaagggcaactcattcacaaccatctcagccagagatcct
cagttcagtgggaaggacagtgggaaaggagacagtgactttaatgacagtgactctgac
atcagtggagatggacacaaaaaagactccccaccaataaacagtctctgggcctgcacc
agtgagtgtaaaatcctaggccactcagaccgatgctggagcccctcagcctctagaccc
aacaccagcctctcccacggaccacacctctcaaccttctccaagacagcctcgttgcca
cggaacactctgcaaagagacacctactaccaacaggctcacctacccaagaccaacggt
ctgcaaagcgtctatgaaaaagtccagcaccaagaatttgattatattctggtttgtcca
ccaacaccagccaggatactagagactggtgagatatccctcccggagtatggacactct
taa
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