KEGG   Salmo trutta (river trout): 115161356
Entry
115161356         CDS       T08542                                 
Name
(RefSeq) protocadherin-17-like
  KO
K16499  protocadherin delta 2
Organism
stru  Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:stru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:stru04515]
    115161356
Cell adhesion molecules [BR:stru04515]
 Cadherins
  Protocadherins
   115161356
SSDB
Motif
Pfam: Cadherin Cadherin_2 PRIMA1 Cadherin_C_2
Other DBs
NCBI-GeneID: 115161356
NCBI-ProteinID: XP_029568145
Ensembl: ENSSTUG00000014387
LinkDB
Position
24:43504374..43528602
AA seq 1107 aa
MRLPVLFFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGKKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPGYM
LELPENSPPGRMLIDVNATDQDEGSNGQIVYSFSGYASDRVQELFYIDPNTGVIKIQGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLLLNDTAEIMVPRNVGLGYIVTTVRAVDQDHGESGRLTY
EIWEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKANT
GAMTAGESSASGEQQHWDMSLPLIITLCIISLMLLAVMTTIAVKSKHQDKEAENYNCRMA
EYSNSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMNVVSSPSLITSPICFDYQATSP
LPLTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMNRMSVIQTDNFPSEPNNMAN
RQPFAQSSSTFKDAERASLRDSGHGDSDQADSDLDTNKGCACNTSAREALKMKATAVNGQ
PLDQGQGRSVHCTDECRALGHSDRCWMPKLRVGGQADSGDNRTDLFIPVGMEATTETEIY
GSLNRSAARKTLSTFGKEQRDSTILVANIKPYFKSQRARSPQLQECSSVSNSPTKGNTPL
DSHTKGPREEVGRDGEGGSDSSAYGPPDGQCSPPHTELEEPSYMACDLRPKSLSNSLIHS
SEIRSGIISQECGGMECVSPNQRDSGD
NT seq 3324 nt   +upstreamnt  +downstreamnt
atgcgtcttcctgttctatttttccttctcttctgggctaaagcccggacactgaaaaat
ctcaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggacccgtggagaaaggaaaaaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgg
attgacagggagacattgtgcaaacgcaaccccaagtgtcagctctccatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccctcagatcacatcaatattgatatttcagagaatgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctggacaaaacggaataaagacttat
caggtcaccagagatgattacaatacattttctttggacttgaaattgaggggtgatgga
accatctatcctgaattggtggttcagcgccctctagatagggaagatcagtctcatcac
accctccttttgacagccattgatggaggcgagtatccaagatcagggtccatgcaaatc
aatgtgagagttactgattcaaatgataatagcccggtatttgacaaacccggctacatg
ctggagcttcctgaaaactcaccgcctggaagaatgctgatagatgtgaatgcaactgac
caagatgagggcagcaatggacagatagtctattctttcagtggatatgcatccgataga
gtccaggagttgttttacattgatcccaacacaggtgtcattaagattcagggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctggggcctaac
cccatccctggccattgtaagatttcagtcaaagtgcttgacaagaatgataactggccc
gttataagttttgtctccgtccgccagggagctatcagtgaggcagcgcctccagaatct
gtcatcgccctggtgagagtcactgataaggattctgggaggaatggccagctccagtgc
agggtgcttggcaatgtaccattcaggctgcaggaaaacaacgataatttttacactctg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaacggaataccttcgttgaattacaccaaatcgttcacagtgaaaatcttagat
gagaatgataacgcaccacgtttcaccaagacagtgtacgtgctgcaggtgcctgagaat
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagtttacacctac
gtgtctgtcaatcctaccaacggagccatatacgcatcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcagggtctcctcatatggagggc
agtgccaccgtcagggtcagtgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctcctgctaaatgatactgcggaaatcatggtacctagaaatgtaggcctggggtac
atagtgaccacagtgagagcagtcgatcaggaccacggggagagcggtcgtctgacctac
gagatttgggagggtaacgaggagcacctgtttgagatggaccctgtggccggcgaggtg
aggactgcccatgctgtgtgggaggacgtggccccagctgtagagctggtagtgaaggta
accgatcacggcaagcccccgctgtctgccgtggctaagctgatcattaaggccaacaca
ggagccatgacagcaggggagtccagcgccagcggggagcagcagcactgggacatgtcc
ctgcccctcatcatcaccctctgcatcatctccctcatgctcctggctgtcatgactacc
atcgccgttaagtccaagcatcaagataaggaggctgagaattataactgccgtatggcc
gagtactccaactccaatcccccggttggaaacggcaagaagaagaggatcaacaagagc
gacatcatgctggtgcagagcgaggtggaggagagggactctgtgagcaggatgaacgtg
gtgagcagcccgtctctcatcacctcacctatctgtttcgactaccaggcgaccagccca
ctgcctctcacgctgcccaggtcagaggtcatgtacctgaaaaccactttcaacagcctg
acggtacctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatg
aatagaatgtcagtgatacagacggataattttccttcggagccgaataacatggccaac
aggcaaccatttgctcaaagcagctcaacttttaaggatgcagagcgagcgagcctccga
gacagtggccatggtgatagtgaccaggctgatagtgacctggatactaataaaggctgt
gcctgcaacacgtctgccagggaggccctcaagatgaaagccacagcagttaatggccag
cctcttgaccagggacaaggcagatctgttcactgcacagatgaatgtcgtgcgctgggc
cattctgacagatgctggatgccaaagttacgggtaggaggccaagcagacagcggcgat
aatcgcaccgaccttttcatcccagtgggaatggaggccacgacggagacagagatttat
ggcagcctcaaccgcagcgcagccagaaaaaccctcagcacgttcggcaaggagcagcgg
gacagcaccatcctagtggccaacatcaaaccctacttcaagtctcagcgtgcccgcagt
ccccagttgcaggagtgctcctctgtgtccaacagccccaccaaagggaacacacccctg
gactcccacaccaaagggcctagggaggaggtggggagggacggggaggggggctcagac
agcagtgcctatggaccccccgacggccaatgttcaccgccccatacggaattggaggag
ccgtcatacatggcttgcgacctcaggcccaagtccctgtcaaacagccttatccacagc
tctgagatcagatctgggatcatcagccaggagtgtggggggatggagtgtgtcagtcca
aaccagcgggactctggggactga

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