Salmo trutta (river trout): 115161390
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Entry
115161390 CDS
T08542
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stru04131
]
115161390
Membrane trafficking [BR:
stru04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115161390
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
115161390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_HPS5
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
115161390
NCBI-ProteinID:
XP_029568199
Ensembl:
ENSSTUG00000017181
UniProt:
A0A673ZD21
LinkDB
All DBs
Position
24:complement(45686698..45922828)
Genome browser
AA seq
1168 aa
AA seq
DB search
MKKFRKVLDGLSSSSQGAVASPSCSSAAGTPPTPQDIHVHETLVSENFHICKTVRHGFPY
KPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALVTACA
DDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNVESFVLSG
YVIMWNKAIELATKAHPGPVVHLSDSPKDECKLLIGFESGTVVQWDLRAKKVDFRIYYDE
AIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKEGRKESCKPILKVE
YKTSRNSSEPYIIFSGGLSYDKVGGRRPTLTIMHGKAVTVLEMDHPIVEFLVLCDTPYSN
EIQDPYAVVLLLEKDFIMVDLTQRNFPIFENPYPMDIHESPVTCTAYFAECPPDIIPVLY
SVGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEVIVTGHADGTVKFWDASAITLQMLYKLK
TSKVFENPNAGEGRAVELVEEDPYAIQMVSWCPQSRLFCVVGISAHVILYRFSKHEANTE
IVSLEVRLQFDSEDVISPSETENNPCFSDPSSHSPQMSGSPGNNSQDSLHYLKVKNRPVR
MPPGYQAELVVQLQWVDREPPQQITSLDINSAYGLLAFGSCNGLVMVDYIQKTILMCVST
LDLYGAADPYQRLTRSPRKNRQSTSEFCMRSLSHFYSDSKKRIRTSYQSLTELSDNQVSM
DMERSKSPNSDHVNGHCTSPTSQPCSMGKSRIPGAPEGSRLTRRGPGRPPFRKAQSAACM
EISLPVSSLTEESRENSFSRSRSSSVSSIDRDTKEAVTTLQFGESYGRKADSLPTACLWV
GTSLGVVLLLPISIPTEKERLEEPVTMGPSGTILMLKGSVLCFSFLDCGGTLIQSPYEVW
QEPEDPDEPRRRKLVNLSPLSSQEACGDGHLAVVCSEKQAKVILMPTQAVLFTHNVTESS
FLLRADVVSVCNSVCLACFCANGHVMTLSLPSLRLLMDTNYLPLTDVRIARTFVFTNGGQ
ALYLTSPTEIQRIAYSQEMTDNLQDMLGELFTPIETPEAQNKGFLKGFFGGNTQTFDREE
LFGEAAAGKASRSLAQHIPGPMGLENVRAAAGGVVGDLARARIALEQRGERLGELEERTT
LMLKSAETFSTHAHQVMLKHKDKKWYQL
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtactggatggcctgtcctcctcctctcagggggctgtcgcg
tccccgtcatgcagcagtgcagctggtacaccgcccactccccaggatatccatgtccat
gagacgctagtctcggaaaactttcacatatgcaagacggtacgccatggcttcccctac
aagcccacctgcctggcattcgacccagtccagaagatcctggccattggctccagaaca
ggaggcatacggatactgggccggcctggtgtggactgctacagccagcatgagagtgga
gccgctgttctccagctacagttcctcatcaatgagggagctctggtcacagcatgtgca
gatgacacactgcacctgtggaaccttcgccagagacgcccagccatcctgcactcgctc
aaattcaacagggagaggatcacgttttgccacctccccttccagagtaaatggctgtac
gtgggcacagagcgtggcaacacacacatcgtcaacgtcgaatccttcgttctgtctgga
tacgtcatcatgtggaacaaggccatagaattagcaactaaagcccatccagggcccgta
gtccatctgagtgacagcccgaaggatgaatgcaagttgctgatagggtttgaaagtgga
acagtagtgcagtgggacctccgagccaagaaagttgacttcagaatctactacgatgaa
gctatccattctgtgagctggcaccatgaagggaagcagttcatgtgtagccactcagac
ggcagcctgactatgtggaacctgaggaacacagccaggcctattcagatcacatatcct
catgggaagatactgaaggaagggaggaaggagtcatgtaagcccatcctcaaggtggaa
tacaagacctccagaaacagcagtgagccctacatcatcttttctgggggtctgtcgtac
gacaaggttgggggacggagacccaccctgaccatcatgcatggcaaggccgtcacggtg
ctggagatggaccaccctatcgtagagttcctggtgctctgtgacaccccatactccaac
gagatccaggatccctatgcagtggtgctgcttttagaaaaggacttcatcatggttgat
ctgacacagagaaatttccccatctttgagaacccataccccatggacatccacgagtct
cctgtcacctgtacggcctacttcgccgagtgtcccccggacatcatcccagtcctctac
tccgtaggagccaagcagaagaagaccggctacagccacaaggagtggccagtgagtggc
ggtacgtggacgttaggctcacagacctacccagaggtcatcgtcacaggacacgcagac
ggaaccgtaaagttttgggacgcttctgcaattacgctccagatgctgtacaagttgaag
acgtctaaggtgtttgagaaccccaatgcgggtgaaggccgggcggtcgagctggtagag
gaggacccttacgccattcagatggtcagctggtgcccgcagagccgtctcttctgtgtg
gtgggcatctctgcccacgtcatcctctaccgcttcagcaaacacgaagccaacacagag
atagtgtcactagaagtgcgtctgcagtttgactcagaggacgtcatctccccatcagag
acagagaacaacccgtgtttctcggaccccagttcccactccccccagatgtccggtagc
cccggcaacaactcacaagacagcctccactacctcaaggtgaagaatcgtccagtgcgg
atgcccccggggtaccaggctgagttggtggtgcagctgcagtgggtggatagagagccc
ccccagcagatcaccagtctggacatcaactctgcctatggccttctagcatttgggagc
tgcaatggtctagtgatggtggactacattcagaagaccatcctgatgtgtgtgagcacg
ttggacctgtacggagccgctgacccctaccaacgtctcacacgctccccacgcaagaac
agacagtccacctcagaattttgcatgcgcagcctgtctcacttttattcagattcaaag
aaaaggatccgcacgtcctatcagagtctaacggaactgtccgacaaccaggtgtccatg
gacatggagagaagcaagtcgcccaactcagatcatgtcaatggacattgcactagtccc
acctcccagccatgctccatggggaagtctcgcattccaggggctcctgagggctcgcgg
ctcacccggagagggcccggccggccacccttccgcaaggcccagtctgccgcttgcatg
gagatctctttgcctgtttcctccctcacggaagagagcagagagaattcgttcagccgc
tcgcggagctccagtgtgtccagtatcgaccgcgacaccaaggaagcggtgaccacgctg
cagtttggagagtcctacggtcgtaaagctgactccctgcccaccgcctgcctgtgggtg
ggcaccagcctgggtgtggtcctcctactgcccatatccatccccacagagaaggagagg
ctggaggagcctgtcaccatggggcccagcggtaccatcctgatgctgaagggctcagtg
ctatgcttttccttcctggactgtgggggcactcttatccagagtccctacgaggtatgg
caggaacccgaggaccccgacgagccccgcaggcgcaagctggtcaacttatccccactg
tcttcccaggaggcatgtggggacggtcacctggccgtggtgtgttctgagaaacaggcc
aaggtcatcctcatgcctacccaggctgtcctgttcacacacaacgtcacagagtcttcc
ttcctcctgcgggctgacgttgtctccgtctgcaacagcgtctgcctggcctgcttctgc
gccaacggacacgtcatgaccctcagtttgcccagtcttagactcctaatggatactaac
taccttcccctgacggacgtgcgtatcgcccgcaccttcgtcttcaccaacggcggccag
gctctgtacctgacctctcctacagagatacagcgcatcgcatacagccaagagatgaca
gacaacctgcaggacatgctgggtgagctcttcactcctatagaaacgccagaggcccag
aacaaaggattcctcaagggcttcttcgggggcaatacccagaccttcgacagagaagag
ctgtttggggaggcagcagcaggtaaggcctctcggagcctggcccagcacatccctggt
ccaatgggattggagaacgtgagggctgcagccggcggggtggtgggggacctggcccga
gcccgcatcgccctggagcagagaggagagagactgggagagctggaggaacgcaccacc
ctcatgttaaaaagtgcagagaccttctcaacacacgcccaccaggtaatgctgaaacac
aaggacaagaaatggtatcaactttaa
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