Salmo trutta (river trout): 115161416
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Entry
115161416 CDS
T08542
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04145
Phagosome
stru04210
Apoptosis
stru04530
Tight junction
stru04540
Gap junction
stru04814
Motor proteins
stru05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115161416
09143 Cell growth and death
04210 Apoptosis
115161416
09144 Cellular community - eukaryotes
04530 Tight junction
115161416
04540 Gap junction
115161416
09142 Cell motility
04814 Motor proteins
115161416
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115161416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stru03019
]
115161416
03036 Chromosome and associated proteins [BR:
stru03036
]
115161416
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stru04812
]
115161416
04147 Exosome [BR:
stru04147
]
115161416
Messenger RNA biogenesis [BR:
stru03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115161416
Chromosome and associated proteins [BR:
stru03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
115161416
Cytoskeleton proteins [BR:
stru04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
115161416
Exosome [BR:
stru04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115161416
Exosomal proteins of other body fluids (saliva and urine)
115161416
Exosomal proteins of colorectal cancer cells
115161416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
115161416
NCBI-ProteinID:
XP_029568248
LinkDB
All DBs
Position
24:complement(48153019..48156565)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISMHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTCGGGDDSFNTFFSETGAGK
HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGEEDEEGEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatttctatgcatgtgggccaagccggagtccagatgggcaatgcctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
acctgtggaggtggagacgactccttcaacaccttcttcagtgagaccggagccggaaag
catgtcccccgagccatcttcgttgatctggagcccactgtcatcgatgaggtgaggaca
ggtacctatcgccagctgttccaccctgagcagctcattacgggtaaggaagatgctgcc
aacaactacgcccgtggtcactacaccatcggcaaggagatcattgacttggttctggac
aggacacgcaaattggctgaccagtgtactggactccagggattcctcatcttccacagc
tttggaggaggcaccggttctggtttcacctccctgctgatggaacgtctgtctgtggac
tacggaaagaagtctaaacttgagttcgccgtttacccagctccccaggtgtccacagct
gtagtggagccctacaactccatcctgaccactcacaccaccctggaacactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgcaggaacctcgatattgag
cgtccctcgtacaccaacctcaacaggctcattggccagatcgtctcctccatcactgcc
tccctgagattcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggccacctatgccccagtcatctcagctgagaag
gcctatcacgagcagctgtcagtcgctgacatcaccaacgcctgcttcgagccagccaat
cagatggtgaagtgtgaccctcgtcatggcaagtacatggcctgctgtctcctgtaccgt
ggtgacgttgttcccaaagatgtcaactctgccatcgctgccataaagaccaaacgtacc
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggcggttcctggaggagacctggctaaagtccagagggccgtgtgcatgctgagcaac
accacagccatcgctgaggcctgggcccgtctggaccacaagtttgacctgatgtatgcc
aagagagcctttgtgcactggtacgtgggtgagggcatggaggagggggagttctctgag
gccagagaagacatggcagccctggagaaggactatgaagaggttggcactgacagcgtg
ggagaagaggatgaggagggagaggaatattaa
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