Salmo trutta (river trout): 115161438
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Entry
115161438 CDS
T08542
Name
(RefSeq) interferon a3-like isoform X1
KO
K05414
interferon alpha
Organism
stru
Salmo trutta (river trout)
Pathway
stru04060
Cytokine-cytokine receptor interaction
stru04217
Necroptosis
stru04620
Toll-like receptor signaling pathway
stru04621
NOD-like receptor signaling pathway
stru04622
RIG-I-like receptor signaling pathway
stru04623
Cytosolic DNA-sensing pathway
stru05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115161438
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115161438
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115161438
04621 NOD-like receptor signaling pathway
115161438
04622 RIG-I-like receptor signaling pathway
115161438
04623 Cytosolic DNA-sensing pathway
115161438
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115161438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
stru04052
]
115161438
Cytokines and neuropeptides [BR:
stru04052
]
Cytokines
Interferons
115161438
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Interferon
DUF2262
Motif
Other DBs
NCBI-GeneID:
115161438
NCBI-ProteinID:
XP_029568284
Ensembl:
ENSSTUG00000027046
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Position
2:67894904..67898329
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AA seq
215 aa
AA seq
DB search
MVYLNISNKTVTIDIAKPILYYKDILFFAPRLVFITNMHRPTKSLLICLFLTMCDGFSMG
CRWMDDHKFIQHSETLMNLLNIMGGEFTTDSVDVPFPEDLYKQAELLPTDDTIWFILQTL
DKIAELFDGELDSVWDEKKVEIFLSVLTSQSDGLQSCVTAQKKNSKNLQMYFKRLNNQVL
KRMAYSAHAWELVRKEVRTHLMRLVLLGSATENSI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggtatacctaaacattagtaacaagacagttacaattgacatagctaagcctattttg
tattacaaagatatacttttttttgctccacgtcttgttttcattaccaacatgcatagg
cctacgaagtctttgcttatttgtttgtttctaaccatgtgcgatggtttctcgatgggc
tgtagatggatggatgatcacaaattcatacaacacagtgagaccttaatgaacttactc
aatattatgggtggggagtttactacagacagtgtggacgtacctttcccagaggacctg
tacaagcaagctgaacttttaccaactgatgatacaatttggttcatcctccaaaccctt
gacaagatcgctgaactgtttgatggagaactagactctgtctgggatgagaagaaagtg
gagatcttcctcagtgtcctcaccagtcagtctgatggccttcagtcatgtgttacggcc
cagaaaaaaaatagcaagaatctgcaaatgtacttcaagaggctgaacaaccaagtcctt
aaaagaatggcatacagtgctcatgcatgggagctggtcaggaaagaggttaggacacat
ctgatgaggctggttcttctgggttcagctacagaaaacagcatctaa
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