Salmo trutta (river trout): 115161455
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Entry
115161455 CDS
T08542
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
stru
Salmo trutta (river trout)
Pathway
stru03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
115161455 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stru03400
]
115161455 (xrcc5)
DNA repair and recombination proteins [BR:
stru03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
115161455 (xrcc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
115161455
NCBI-ProteinID:
XP_029568305
Ensembl:
ENSSTUG00000010206
UniProt:
A0A673XRP0
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Position
24:complement(49694755..49724170)
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AA seq
715 aa
AA seq
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MARSAKTALVLCLDVGFSMSNSAPGQETPFQLAKKVIQKFVQRQVFAENKDELALVLFGS
DNTKNNLAKDGQYQNISVHRQLMIPNFELLEEIQNDVHPGSQQADWLDALVVCMDLLQNE
TLGKRYERQNIVLLTDLNTPSSPDQLDVIIGNLKRSGVTLQFFLPFPVDGGGSKPPDGGK
GLSAEQQQGLEMTKQVMMSLDEDDGLEEVYTFSDAIEKLSVFKRVEKRPMAWPCTLTIGS
SLAIKIVGYKAVCEERPRKSWSVVDAQTHQKDDIKRDVVYCLNDDEETEVQKDDTIQGYR
YGSDIVPFSKVDQDQMKYKTDGKSFAVLGFTKQSMISRHQFVGTQVLKVFAPKDDEHAGV
ALSGLIRALDDLKMVAVVRYVYARNGNPQVGAAFPCIKEKSECLVYVQLPFMEDLRQYSF
PSLENNKKYTPSEEQLSAVDSLIDSMMLVEEDEDGEKMDLFKVNHIPNPQYQRLFQCLHH
RAVNPSAPLPPMDPWLTAALQRPLAVASRCQAPLETMKKKFPLKEVVKKKELKTSKELFG
NSTEESDAKKAKVDEDDDFNLADITEGSITQVGSVDPARDFRTLIRQKSLPFGEVCQQLT
GRIEQLLGNKNMNYYIKCIPCIQTFREQSVQVGNADHYNSYIQSLKTSIPVRGLQEFWDM
LVQDALTLINKDEVDGSRFSSHDAKQFLTAEEKKEEVVAAVVDDTGDVDDLLDMM
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttcagcgaagacagcgttggttctgtgtctggatgtgggtttctccatgtcc
aactctgccccgggacaggaaacgcccttccaactggccaagaaagtcatccagaagttt
gttcagcgccaggtgtttgctgagaacaaagatgagctggctctggtgctgtttgggtca
gacaacactaagaacaacctagctaaagacggccagtaccagaacatctcagtacaccgc
caactcatgatcccaaactttgagctgctggaagagatccagaatgatgtgcaccctggg
agtcaacaggctgactggctggatgctctcgttgtgtgcatggacctgcttcagaacgaa
actctgggaaagagatatgagcgtcagaacatcgtcctgctcacagacctgaacacgccg
agcagtcctgaccagctggacgttatcataggcaacctgaagagatccggagtcactctg
cagttcttcctacccttccctgtagatggagggggttccaaaccccccgacgggggtaaa
ggtctgtccgcagagcagcagcagggcctggagatgaccaagcaggtcatgatgtctctg
gatgaagacgacggtctggaggaagtctacaccttcagtgacgctatagagaagttgtca
gtatttaaacgggttgagaagagacccatggcctggccctgtactctgaccatcggcagc
tctctggccatcaagattgttggctacaaagcagtatgtgaggagagacccaggaagtcg
tggtcggtggtagatgctcagacacaccagaaagacgacataaagagagatgtagtttac
tgtctcaatgatgacgaagagaccgaggtacagaaggacgacaccattcaagggtatcgt
tatggaagtgacatcgtccccttctctaaagttgaccaggaccagatgaagtacaagacg
gatgggaagagttttgctgtgctgggcttcaccaaacagagcatgatcagcagacaccag
ttcgtggggactcaggtcctcaaggtgttcgcccctaaagatgacgagcatgcaggtgta
gctctctcaggtctgatccgcgctctggatgacctcaagatggtggctgtggtgaggtat
gtttacgcccgcaatggaaaccctcaagtaggagcagccttcccctgtattaaggagaag
tctgagtgtctggtctacgttcagcttcccttcatggaagatctgaggcagtacagcttc
ccttccctggagaacaacaagaagtacactccctcagaggaacagctgtcagcggtggac
tctctgattgactccatgatgttggtggaggaggatgaggatggagagaaaatggacctc
ttcaaagtcaaccacattcccaacccccagtaccagagactgttccagtgcctgcaccat
cgggcggtgaatcccagtgctccgctcccccccatggacccctggctgactgcagctctc
cagcgccccctggcggtggccagccgctgtcaagcccccctggagacgatgaagaagaag
ttccctctgaaggaggtggtgaagaagaaggaactgaagaccagcaaggagctgtttggg
aacagcactgaggaatctgatgccaagaaggccaaagttgacgaggatgacgactttaac
ctggctgacatcacagagggaagcatcacacaggtgggcagtgtagatccagcacgggat
ttccgcactctgattcgccagaagagtcttccgtttggagaggtgtgtcaacagctgact
ggcaggatagagcagttgcttggaaacaagaacatgaactactacatcaagtgcatcccc
tgtatccagaccttcagagagcagtctgtccaggttgggaatgctgatcactacaacagc
tacatccagtctctgaagacgagtattcccgttagaggccttcaggaattctgggatatg
ctagtccaagatgccctgactctgatcaacaaggacgaagttgacgggagccggttctcc
agtcatgatgccaagcagttcctgactgcagaggagaagaaagaggaggtcgtagcagct
gtggtggacgatacgggagatgtggacgacttgctggacatgatgtga
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