Salmo trutta (river trout): 115161463
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Entry
115161463 CDS
T08542
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
stru
Salmo trutta (river trout)
Pathway
stru04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115161463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stru04121
]
115161463
Ubiquitin system [BR:
stru04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115161463
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Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
115161463
NCBI-ProteinID:
XP_029568313
Ensembl:
ENSSTUG00000010901
LinkDB
All DBs
Position
24:complement(50112137..50145602)
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AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGDMSTGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNTKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEGNGLLPDDKLTLFCEVSVVQDSVNISGQSNINMLK
VPECQLSDDLGNLWQCSRFTDCSLYVGGQEFKAHKSILAARSPVFSAMFEHEMEESKKNR
VDISDVEPDVFKEMMGFIYTGKAPNLDKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcctacccctcctccaccaggggacatgtctactggacctgtggcagag
agctggtgttacacacaggtaaaagtagtcaagttctcctacatgtggaccatcaataac
ttcagtttctgtagagaggagatgggggaggttttaaagagttccaccttctcctctgga
cccaacgacaaaatgaaatggtgtctgagagtcaacccaaaaggactggatgatgaaagc
aaagattatctgtcgttgtatttacttcttgttagttgtccaaaaagtgaagtcagagca
aagttcaagttttccttattgaacactaaaagagaagagactaaagctatggaaagccaa
agagcctatcggtttgtccaggggaaggactggggcttcaagaagttcattagaagagat
ttcctgcttgatgaaggcaacgggctgttacctgacgacaaactcaccctgttctgtgag
gtgagtgtggtgcaggactctgtgaacatctctggccagtccaacattaacatgctgaag
gtcccagagtgccagctgtcagatgacctggggaacctgtggcagtgttctcgcttcact
gactgctccctctatgtgggagggcaggagttcaaggcacacaaatccatcctggcagcg
agatctcccgtctttagcgccatgtttgaacatgaaatggaggagagtaaaaagaaccgt
gtggacatcagtgatgtggagccagacgtgtttaaggagatgatgggattcatctacaca
gggaaagctcccaacctggacaagatggccgataacctgctggcagctgctgacaaatat
gccttggagcgtttaaaggtgatgtgtgaagaggctctgtgcaacagcctctctgtggag
aacgtggctgataccctcatcctggcggatttacacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctccgacagctgggctgtaaagatgggaaa
aactggaatagcaatcatgccacggacataatggagacggcaggctggaagtcaatgatc
cagtcccaccctcacttagtggccgaggccttcagagccctggcatcggcacagtgcccg
cccttcggcctgccgaggaaacgcctaaaacagtcctga
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