Salmo trutta (river trout): 115161539
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Entry
115161539 CDS
T08542
Name
(RefSeq) protocadherin-8-like isoform X1
KO
K16499
protocadherin delta 2
Organism
stru
Salmo trutta (river trout)
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
stru04515
]
115161539
Cell adhesion molecules [BR:
stru04515
]
Cadherins
Protocadherins
115161539
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
115161539
NCBI-ProteinID:
XP_029568372
Ensembl:
ENSSTUG00000014361
UniProt:
A0A673YGI4
LinkDB
All DBs
Position
24:43431755..43435829
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AA seq
971 aa
AA seq
DB search
MGSCGFRGVGECVVLAVLFYSVQSTTTRYYTYEEDAPGTEIGNLSQDLKIDPAEDPQTSF
RFMQETNSCVIQMREIDGLLTVGETIDREQLCPRSPRCFVTFDIVAFSKEKFQLIHVEIE
VKDINDNSPQFLHNETTLEISENVQVDSRFPLDIAVDHDVGNNYIQSYHISPSSHFIVDV
RSREDGVKYAELVLVKAMDREAEDSYTVEVTAADGGEPPRSGSMTVHIKVLDFNDNSPTF
EHNSLKVELYEDSPVGYQVLKVHAFDPDAGINGEVVYGFVEDTSSEAMGIFNIDRISGAV
TLKTLVDYEKKISYELKIKASDLGTNSIPSTCKVVVDIVDVNDNGPEITIKPKTSTSDDV
AYITEAAAEGSFVALISTSDSDSGSNGYVRSSLHGHEHFKLQQAYGDSFMIVTTTTLDRE
TIPEYNLTVVAEDLGTPPFKTIKQYTIRVTDENDNAPLFSKSIYEVSVLENNIPGSYITT
VVARDLDLGKNAKVSYKLIDSEVVGETSILTYVSIDPVSGSLYSLRSFDFETLPQIELTI
QADDKGSPQLSSTSVIRINVVDQNDNYPYFTFPVMLNDSAEIPLPVNAPLGYLALRVKGH
DEDEGMNGELSYRIVQGDSKIFSINKDTGEIALKQGLASAFGDVLEIKIALSDSGRSPLS
SSATIRFVVTDLQLSDDQLVIVLRSSDEESAGLDISVVVIIILGGGCTLLLIAIAIVVIT
CKLNRGRKDHDSKRDVTHSLFDSRHHPRLNSAQPKMFGDPRGFLNERTSSSLDESSLYEE
KSGELESQMFLPPKPFQPSSGWQGDKYYPQISSGIDQQSVKDSGKGDSDFNDSDSDISGD
GGKRNLRTFQPWAKGSFHAANTLAVDCQGTYCVIPTQSFQAPRDNAYTIGFIQAPVYNNA
HAYPHSWKDSGYNTSIPKARNTMQTFSHHTGTLPSYFTHQKRQSAAGLDEIPEHNQDITT
VATISEVATIL
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgggatcttgcgggtttcgaggagttggagagtgcgtggtgcttgctgttctgttctac
tcggttcagtctacgactacaaggtactacacgtatgaagaggatgcgcccgggacagag
attggaaatctgtcccaggatttaaagatagacccagctgaggaccctcaaacatctttc
cgcttcatgcaggagaccaattcgtgtgtgattcaaatgagggagattgatggactttta
actgttggggaaacaattgaccgggagcagctgtgcccgaggtccccgcggtgttttgtc
accttcgacatagttgctttctccaaagaaaagtttcagctgattcacgtagagatcgag
gtaaaggacatcaacgacaattcaccccagtttctccacaacgagacgacccttgagata
tccgagaatgttcaggtggactcccgattcccgttggacatcgccgttgaccatgatgtc
ggcaataactacatccaaagttatcatatctctccctccagccatttcatagttgatgtg
cgcagcagggaggatggagtgaagtatgctgaacttgtgcttgtgaaagcaatggacaga
gaggctgaagattcctatacagttgaagtgacggcagcagatggaggagagccacccagg
tccggatcaatgactgttcatatcaaagtgctggattttaatgacaacagcccaacgttt
gagcacaactcactaaaagttgaactttacgaggattctcctgtaggttaccaagtgctt
aaggtgcatgcgtttgatccagatgctggcatcaatggcgaggtagtgtatggattcgta
gaagacacatcatctgaagcaatgggtatttttaatatagaccgtatttccggtgctgta
actttaaaaacattggttgattacgagaagaagatatcctatgaactgaaaattaaagca
tctgatttaggcactaattctattccatcgacatgcaaagtggttgttgatatcgtagat
gtaaatgataacggaccagaaatcaccatcaagccaaagacctcgacgagtgacgatgtg
gcttacatcacggaggccgcagcggagggaagttttgtggcactaatcagcacctcggac
agcgactctggctcgaacggttatgtgcgcagtagcctacacgggcacgaacatttcaag
ttgcaacaggcctacggcgacagttttatgattgtaacaaccaccactttagatagagaa
acgatcccagagtataacctcactgtagtggctgaagacctcggtactcctcctttcaaa
accatcaagcagtataccatcagagtgacggacgagaacgacaacgcccccctcttcagt
aaatctatttatgaagtttctgtcctggaaaataatattcccgggtcatatataactact
gttgtagcacgggaccttgatctgggtaaaaacgccaaagtgtcatataaactcatagac
tccgaggttgtcggggagacttccattttgacctatgtgtctatagacccagtgtcagga
tcattgtatagcctgagatctttcgattttgaaacgctcccgcagattgaattaaccatc
caggctgacgacaagggctcacctcaactgtcaagcacatccgtgatcagaatcaatgtg
gttgatcagaacgacaactatccctattttacttttcccgttatgcttaatgactctgct
gaaattcctcttcctgtcaatgcaccattggggtatctggcactacgggtcaaaggtcat
gatgaggatgagggtatgaatggtgagctcagctacagaattgtacaaggtgactctaag
atattttcaatcaataaagacactggagaaatagctttaaaacagggtctggcctctgct
tttggagacgtgttggaaatcaagattgcattgagtgacagtgggagatcccctctctcc
agcagtgccaccattcgctttgttgtcacagacttgcagctctcagacgaccaactagtc
attgtattacggtcaagtgatgaggaaagcgcaggcttggatatttcagtagtagtaatc
attatactcggcgggggttgtactctgctgctgattgccatagcaattgttgttatcaca
tgcaaactgaaccgaggaagaaaggaccatgactccaagagagacgtgactcacagcctg
tttgactccaggcatcatcccaggctcaactctgcacaacccaaaatgtttggtgaccca
agaggtttcctcaacgaaaggacttcttcatctcttgatgagtccagcctatatgaagag
aaaagtggagagttggagtcccagatgttcctgcctcccaagcctttccaaccatcatct
gggtggcaaggggacaaatactacccgcaaattagcagtggcattgaccagcagagcgtg
aaggacagtggaaaaggagacagtgacttcaatgacagcgactctgacatcagtggggat
ggaggcaagaggaaccttcgcaccttccagccctgggccaaaggttcattccacgctgct
aacaccctcgctgtggattgccaaggcacttactgtgtaattccaacccaaagcttccag
gctcccagagacaatgcatacacaataggttttatccaagcaccggtctacaacaatgcg
catgcctatccccactcctggaaagactccggttacaacacaagcattcccaaagcaaga
aacaccatgcagacattctctcatcacaccggcaccctcccgtcttacttcacacatcaa
aagagacaatctgctgccggacttgatgaaattccggagcacaaccaagatattactaca
gtggcaaccatatctgaagttgccaccattttgtaa
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