Salmo trutta (river trout): 115161802
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Entry
115161802 CDS
T08542
Name
(RefSeq) estrogen receptor beta-like
KO
K08551
estrogen receptor beta
Organism
stru
Salmo trutta (river trout)
Pathway
stru04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
stru00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115161802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stru03000
]
115161802
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
stru03310
]
115161802
Transcription factors [BR:
stru03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
115161802
Nuclear receptors [BR:
stru03310
]
3. Estrogen like
3A. Estrogen receptor
115161802
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
115161802
NCBI-ProteinID:
XP_029568437
Ensembl:
ENSSTUG00000040315
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Position
25:25108125..25138492
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AA seq
539 aa
AA seq
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MDFSLTGSSELCNRHQQQQPQLQPNVSPSMACFPGSGTDTSPLLQVQKVGSIKAPGLLPT
IYSPLSGMESSSHCIPSSHTGSSHDYSSLAFYNHSTLGYSRPTISDSPSPCPPLSLPLFC
PPHDHGQHNMPSLIQHCPQPLVYSNPNHHAPFVEPKPHNLNLTPSSPLLHPTKLPGKKLC
AICNDHASGYHYSVCSCEGCKAFFKRSIRGHNDYICPRTNQCTIDKNLRKRCKSCRLRKC
YEVGMKKCGMRPKRYSYRGARHRRVPHGQASPGGLVGVGARAQRNLEGGSLPRLELHHSS
LTPEQLISCIMNVEPPEIYLMEDVKRPFTDSSMMMSLTKLANKELFLMNSWAKKIPGFVE
LSLTDQVHLLESCWLEVLMLGLMWRSVDHPGKLIFSADLKLNREEGNCVEGIMIIFDMLL
AATTRFRELNLQKEEYVCLKAMILLNSNICSTSPEIAEDLESRGKLQLLLDSMTDALVWA
ISKQGLSFQLQSTRLAHLLMLLSDIRHISGKGMKHVSDMKNKNIVQVSDLLLEMFTNTT
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggacttctctctgactgggtccagtgagctatgcaatagacatcagcagcagcagcca
caacttcagcccaacgttagccccagcatggcctgtttccctgggagtgggactgacact
tctcccctgctccaggtccagaaggtgggctccatcaaggcccctggactcctgcccacc
atttacagccccctcagtggcatggagagctccagccactgcatcccctcttcccacaca
ggcagcagccatgattacagctctctagccttctacaaccactctacgctgggctacagc
agaccaaccatctccgacagcccctctccatgtcccccactcagtctccctctcttctgt
cccccccatgaccatggccagcacaacatgccctcgctgatccagcactgtccccaaccc
ttggtgtacagcaatcccaaccaccacgccccctttgtagagcctaaaccccacaacctc
aacctcacccccagcagccctctcctccaccctaccaagcttccggggaagaaactctgt
gccatatgtaatgaccatgcttcgggctaccattacagcgtgtgttcttgtgagggctgc
aaggccttcttcaagaggagcatccgagggcacaatgactacatttgtccaaggactaac
cagtgcactatcgacaagaacctccgtaaaagatgcaagtcctgccgcctacgcaagtgt
tatgaagtgggcatgaagaagtgtggtatgaggccaaagcgctacagttacaggggggcg
aggcacaggcgtgtacctcatgggcaggcatcaccaggcgggctggtgggggtcggtgcc
agggcccagaggaatctggaggggggctccctcccccggctggagttgcaccactcatcc
ctgacccctgaacagctgatatcctgcatcatgaatgtggagccgccagagatctacctg
atggaggacgtaaagaggcccttcactgattccagcatgatgatgtcactcaccaaactg
gccaacaaggagctgttcctcatgaacagctgggccaaaaagatccctggctttgtagag
ctgagtctgactgaccaggtgcacctgttggagagttgctggctggaggtgctgatgctt
ggtctgatgtggaggtctgtcgaccatcctgggaaactcatcttctcagcagacctaaag
ctcaacagggaagaggggaactgtgtggagggcatcatgattatatttgacatgctactg
gcagccaccactaggtttcgagagctgaacctccagaaagaggagtatgtctgtctgaaa
gccatgatcctcctcaactccaacatatgctctacttctccggagatagcagaggatctg
gagagcagggggaagctgcagcttctgttggactcaatgacagatgccctggtgtgggcc
atctccaaacaaggcctgtccttccagctgcagtcaacccgcctggcccacctcctcatg
ctgctctcagacatccgccacatcagtggcaaaggcatgaagcacgtctccgacatgaag
aataagaatattgtgcaggtctccgacctgctcttggaaatgttcaccaacacaacttga
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